Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.59□□□□□ -1.36
CDC42BPAQ5VT25 RPL23AP97-201ENST00000568955 471 ntBASIC6.59□□□□□ -1.36
CDC42BPAQ5VT25 IMMP1LP1-201ENST00000605170 488 ntBASIC6.59□□□□□ -1.36
CDC42BPAQ5VT25 MIR6875-201ENST00000617506 72 ntBASIC6.59□□□□□ -1.36
CDC42BPAQ5VT25 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
CDC42BPAQ5VT25 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
CDC42BPAQ5VT25 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 MIR554-201ENST00000384874 96 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 LINC01881-201ENST00000416103 412 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 TBCAP1-201ENST00000436520 327 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 SERPINA7P1-201ENST00000443077 631 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AL162151.2-201ENST00000448875 158 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AC091959.2-201ENST00000477363 321 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDC42BPAQ5VT25 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AC068870.3-201ENST00000625077 2536 ntBASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 ARAFP2-201ENST00000440565 559 ntBASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AL512326.1-201ENST00000443050 721 ntBASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 RNA5SP360-201ENST00000516555 118 ntBASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AC025175.1-201ENST00000606482 759 ntBASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 NXPH1-205ENST00000602349 1953 ntBASIC6.57□□□□□ -1.36
CDC42BPAQ5VT25 AL672167.1-204ENST00000641875 3017 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AL445584.1-201ENST00000431451 330 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 CCNG2P1-201ENST00000549521 1000 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AC053481.3-201ENST00000577881 843 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 ZNF402P-201ENST00000404435 3100 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AL080315.1-201ENST00000406055 466 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AF213884.1-201ENST00000488102 463 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AC069304.1-201ENST00000491593 704 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 BNIP3P33-201ENST00000598912 569 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 AC104623.2-202ENST00000623477 4002 ntBASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.56□□□□□ -1.36
CDC42BPAQ5VT25 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 MAPK10-349ENST00000641767 3661 ntBASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.55□□□□□ -1.36
CDC42BPAQ5VT25 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms