Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC005077.1-201ENST00000449226 375 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 OR52E3P-201ENST00000452083 936 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC072039.1-201ENST00000477611 581 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 RPS7P6-201ENST00000485777 579 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 PPP1R11P1-201ENST00000486095 376 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC104685.1-201ENST00000502445 371 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC004069.2-201ENST00000505438 1114 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC098799.3-201ENST00000506095 438 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC011352.1-201ENST00000512300 793 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 HSD3BP3-201ENST00000514706 994 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 RNU6-720P-201ENST00000516363 108 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC138832.1-201ENST00000522871 556 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.26□□□□□ -1.57
CLRN1P58418 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.26□□□□□ -1.57
CLRN1P58418 OR8A2P-201ENST00000528631 952 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC084121.1-201ENST00000533882 835 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC090424.1-201ENST00000535243 736 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 NMNAT1P5-201ENST00000559657 841 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 NPM1P42-201ENST00000560329 862 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 TXNP4-201ENST00000575018 310 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.26□□□□□ -1.57
CLRN1P58418 AL390838.2-201ENST00000602394 274 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 AL683826.1-201ENST00000624104 627 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.26□□□□□ -1.57
CLRN1P58418 AC087565.3-203ENST00000641018 837 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 AC104966.1-201ENST00000467010 1464 ntBASIC5.26□□□□□ -1.57
CLRN1P58418 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLRN1P58418 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 CDC27P2-201ENST00000425026 1922 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 QRSL1P1-201ENST00000400977 1540 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 SELENOWP1-201ENST00000322792 252 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 SNORA4.1-201ENST00000364263 144 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 RNU6-619P-201ENST00000365146 108 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 Y_RNA.517-201ENST00000384551 106 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 MIR130B-202ENST00000385018 82 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 RPS4XP5-201ENST00000419038 768 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 Z99497.1-201ENST00000421282 135 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC092651.1-201ENST00000426110 312 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 RPS25P9-201ENST00000435591 252 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLRN1P58418 TUBB4BP6-201ENST00000437576 479 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC023141.8-201ENST00000442554 208 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 BMS1P10-201ENST00000443754 1120 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 COX6CP2-201ENST00000444980 225 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms