Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.56□□□□□ -1.52
COPB1P53618 BNIP3P1-201ENST00000547295 580 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.56□□□□□ -1.52
COPB1P53618 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.56□□□□□ -1.52
COPB1P53618 AC106734.1-201ENST00000568646 663 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC007204.2-201ENST00000615022 616 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 AL355493.4-201ENST00000618530 292 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COPB1P53618 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPB1P53618 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 MTCO1P15-201ENST00000529569 1526 ntBASIC5.55□□□□□ -1.52
COPB1P53618 RNA5SP132-201ENST00000364725 118 ntBASIC5.55□□□□□ -1.52
COPB1P53618 RPL5P19-201ENST00000404228 893 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AP002530.1-201ENST00000405705 684 ntBASIC5.55□□□□□ -1.52
COPB1P53618 HIGD1AP15-201ENST00000416198 280 ntBASIC5.55□□□□□ -1.52
COPB1P53618 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AL627308.1-201ENST00000435693 821 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 FABP5P3-201ENST00000437960 408 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 TXNP5-201ENST00000441043 315 ntBASIC5.55□□□□□ -1.52
COPB1P53618 SPRYD7P1-201ENST00000443861 570 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 SYT14P1-201ENST00000481459 721 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.55□□□□□ -1.52
COPB1P53618 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 HPRT1P1-201ENST00000509498 657 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.55□□□□□ -1.52
COPB1P53618 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC010735.1-201ENST00000567305 1026 ntBASIC5.55□□□□□ -1.52
COPB1P53618 MIR3936-201ENST00000584304 110 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 SNX6P1-201ENST00000601728 1224 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AC106052.1-201ENST00000608029 497 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.55□□□□□ -1.52
COPB1P53618 AC093673.2-201ENST00000609674 331 ntBASIC5.55□□□□□ -1.52
COPB1P53618 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPB1P53618 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 MTND5P11-201ENST00000511037 1812 ntBASIC5.55□□□□□ -1.52
COPB1P53618 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPB1P53618 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
COPB1P53618 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COPB1P53618 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 AC007342.5-201ENST00000571340 2142 ntBASIC5.54□□□□□ -1.52
COPB1P53618 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COPB1P53618 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 HSPA8P14-201ENST00000552265 1805 ntBASIC5.54□□□□□ -1.52
COPB1P53618 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COPB1P53618 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 SNORA67-201ENST00000384423 137 ntBASIC5.54□□□□□ -1.52
COPB1P53618 MIR600-201ENST00000385007 98 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AC009804.1-201ENST00000400949 179 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.54□□□□□ -1.52
COPB1P53618 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.54□□□□□ -1.52
COPB1P53618 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 AL450023.3-201ENST00000440592 271 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AL691482.1-201ENST00000453255 87 ntBASIC5.54□□□□□ -1.52
COPB1P53618 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 TPT1P1-201ENST00000458495 518 ntBASIC5.54□□□□□ -1.52
COPB1P53618 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.54□□□□□ -1.52
COPB1P53618 OR2AO1P-201ENST00000476497 403 ntBASIC5.54□□□□□ -1.52
COPB1P53618 RN7SL184P-201ENST00000488308 297 ntBASIC5.54□□□□□ -1.52
COPB1P53618 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.54□□□□□ -1.52
COPB1P53618 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 AC021146.7-201ENST00000509604 775 ntBASIC5.54□□□□□ -1.52
COPB1P53618 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.54□□□□□ -1.52
COPB1P53618 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms