Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSSCA1O60232 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SSSCA1O60232 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SSSCA1O60232 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SSSCA1O60232 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SSSCA1O60232 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 CR383656.5-201ENST00000547616 1340 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SSSCA1O60232 MIR137-201ENST00000385223 102 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AP000534.2-201ENST00000412729 568 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 RSU1P3-201ENST00000412878 835 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.56□□□□□ -1.84
SSSCA1O60232 ARAFP1-201ENST00000422172 605 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 BX119904.1-201ENST00000432026 348 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.56□□□□□ -1.84
SSSCA1O60232 RPL23AP93-201ENST00000440847 484 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AC104306.1-201ENST00000449702 371 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 MYO5BP2-201ENST00000449815 1277 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AL356390.1-201ENST00000455684 397 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 RN7SL585P-201ENST00000470538 280 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 BX284632.1-201ENST00000478218 541 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.56□□□□□ -1.84
SSSCA1O60232 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.56□□□□□ -1.84
SSSCA1O60232 AP001880.2-201ENST00000538233 448 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AL110118.1-201ENST00000553543 400 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.56□□□□□ -1.84
SSSCA1O60232 MIR3691-201ENST00000578066 90 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.56□□□□□ -1.84
SSSCA1O60232 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.56□□□□□ -1.84
SSSCA1O60232 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.56□□□□□ -1.84
SSSCA1O60232 MIR6778-201ENST00000617912 73 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.56□□□□□ -1.84
SSSCA1O60232 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SSSCA1O60232 AC112255.1-201ENST00000624070 2493 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.56□□□□□ -1.84
SSSCA1O60232 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 Z82217.1-201ENST00000625157 8149 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 AC093775.1-201ENST00000624154 1868 ntBASIC3.56□□□□□ -1.84
SSSCA1O60232 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSSCA1O60232 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.56□□□□□ -1.84
SSSCA1O60232 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 IQCB2P-201ENST00000401788 1633 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SSSCA1O60232 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SSSCA1O60232 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SSSCA1O60232 GCNT6-201ENST00000379591 934 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 RNU1-106P-201ENST00000384382 164 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 U3.25-201ENST00000391209 220 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC099535.1-201ENST00000408928 371 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 RNA5SP306-201ENST00000411087 107 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.55□□□□□ -1.84
SSSCA1O60232 NRBF2P3-201ENST00000432731 865 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC016831.4-201ENST00000438302 307 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 UBE2V1P3-201ENST00000439651 417 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.55□□□□□ -1.84
SSSCA1O60232 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.55□□□□□ -1.84
SSSCA1O60232 COPS8P2-201ENST00000473228 627 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 RN7SL30P-201ENST00000488416 306 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC109462.1-201ENST00000491087 368 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC108145.1-201ENST00000503770 153 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AC025554.1-201ENST00000505641 188 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.55□□□□□ -1.84
SSSCA1O60232 BTF3P13-201ENST00000513224 490 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.55□□□□□ -1.84
SSSCA1O60232 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.55□□□□□ -1.84
SSSCA1O60232 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.55□□□□□ -1.84
SSSCA1O60232 AC015922.4-201ENST00000612568 690 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 AC006065.6-201ENST00000625201 545 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms