Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 U3.36-201ENST00000408418 213 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 RN7SKP273-201ENST00000411392 314 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 MTND4P3-201ENST00000417829 541 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 MTCYBP7-201ENST00000419540 1134 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 ZNF885P-201ENST00000420174 1098 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 UBE2V1P1-201ENST00000430836 445 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 MRPL35P2-201ENST00000448009 511 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 IGHV5-78-201ENST00000450948 295 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AL606490.1-201ENST00000452266 765 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AL691482.1-201ENST00000453255 87 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC010468.1-201ENST00000461022 817 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC105031.1-201ENST00000518550 476 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AP006245.2-201ENST00000522004 300 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AL109741.3-201ENST00000561748 592 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 MIR1269B-201ENST00000580405 75 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC011840.5-201ENST00000582125 771 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC105254.2-201ENST00000603636 436 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AL139344.1-201ENST00000605228 195 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AL451086.1-201ENST00000605596 223 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC092159.4-201ENST00000624944 550 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AL121594.5-201ENST00000631724 573 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC01739-205ENST00000641890 573 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC112255.1-201ENST00000624070 2493 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 SNURFL-201ENST00000309296 343 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 OR13C3-201ENST00000374781 1108 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 RNU6-636P-201ENST00000384598 107 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC211486.3-201ENST00000412694 621 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL513175.2-201ENST00000422071 443 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 DDX39BP1-205ENST00000422507 192 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC005189.1-201ENST00000431286 310 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC004980.3-201ENST00000447046 365 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL157827.1-201ENST00000447622 132 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL589880.1-201ENST00000448271 287 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 TCEA1P1-201ENST00000449716 880 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL356981.1-201ENST00000454879 684 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC091180.1-201ENST00000462104 372 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 RPL5P13-201ENST00000462840 709 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC010486.2-201ENST00000505572 483 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 NDUFS5P6-201ENST00000529136 295 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC087897.1-201ENST00000550134 156 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC009094.1-201ENST00000564443 426 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC146944.4-201ENST00000602697 718 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 TAS2R6P-201ENST00000605022 826 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AC012557.2-201ENST00000605919 418 ntBASIC5.29□□□□□ -1.56
TCRBV5S1A1TA0A578 AL512624.1-201ENST00000613638 469 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 502.6 ms