Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS11Q9H270 Y_RNA.6-201ENST00000362350 114 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 RN7SKP69-201ENST00000365390 305 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC013404.1-201ENST00000413068 249 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS11Q9H270 CDK8P2-201ENST00000415020 547 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 RPS3AP37-201ENST00000419176 745 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 OR10T1P-201ENST00000424327 947 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 DPRXP1-201ENST00000426312 460 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC129850.1-201ENST00000436203 508 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC023141.3-201ENST00000436698 278 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC023141.8-201ENST00000442554 208 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 PPIAP7-201ENST00000454070 489 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 MTCYBP1-201ENST00000454315 1119 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC004129.2-201ENST00000457229 287 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC011825.1-201ENST00000484967 388 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 RPSAP51-201ENST00000497462 645 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC010424.1-201ENST00000506336 297 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC108471.1-201ENST00000513977 287 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 RNU2-30P-201ENST00000516209 141 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 IGKV2D-10-201ENST00000520194 281 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AP000620.1-201ENST00000527147 504 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC025260.1-201ENST00000548858 430 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC009101.1-201ENST00000568135 242 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC007346.1-201ENST00000569208 867 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AL354943.1-201ENST00000572103 781 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS11Q9H270 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 VN1R92P-201ENST00000598511 928 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 MTND3P19-201ENST00000603825 345 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC090525.3-201ENST00000605601 189 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AL031601.1-201ENST00000605702 394 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AP003117.2-201ENST00000606010 545 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 AC108747.1-201ENST00000609508 535 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC091931.1-201ENST00000623488 728 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AC079248.2-201ENST00000623779 326 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 AP001029.2-203ENST00000589795 4910 ntBASIC5.82□□□□□ -1.48
VPS11Q9H270 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
VPS11Q9H270 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 MTND5P24-201ENST00000438892 1767 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 RNA5SP27-201ENST00000363839 119 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 SNORA62.2-201ENST00000364672 152 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 RNU5A-2P-201ENST00000384337 116 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms