Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC125257.1-201ENST00000560400 2930 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 RN7SKP103-201ENST00000363848 320 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 TRIM60P17-201ENST00000415181 719 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC016831.4-201ENST00000438302 307 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 Z80107.2-201ENST00000445127 392 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 RPL31P53-201ENST00000457065 348 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 RNU2-30P-201ENST00000516209 141 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC091042.1-201ENST00000579213 173 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 FAM60CP-201ENST00000591086 664 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC138473.1-201ENST00000605717 526 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC004241.3-201ENST00000611728 517 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC107905.1-201ENST00000616204 426 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 MIR6853-201ENST00000619642 74 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC073342.3-201ENST00000624211 193 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 AC083843.3-201ENST00000623679 2186 ntBASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCSER1Q9C0I3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AL355852.1-201ENST00000454081 1771 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AL513533.1-201ENST00000453728 415 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 C1DP3-201ENST00000455013 423 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC011005.3-201ENST00000491624 395 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC117525.1-201ENST00000515228 503 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC084759.1-201ENST00000561168 290 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC098935.2-201ENST00000604222 466 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AP001005.3-201ENST00000622049 129 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 KARSP3-201ENST00000571212 1504 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AL672167.1-205ENST00000641112 3080 ntBASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCSER1Q9C0I3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.21□□□□□ -1.57
CCSER1Q9C0I3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC010132.2-201ENST00000295493 1043 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC012519.1-201ENST00000424588 610 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms