Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU6-1293P-201ENST00000384077 107 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RNU2-16P-201ENST00000410712 136 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RPS27AP14-201ENST00000422868 454 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL158073.1-201ENST00000426848 1104 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RPL23AP74-201ENST00000437246 471 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL138899.2-201ENST00000439139 499 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 POU5F1P5-201ENST00000445059 658 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 ARPC3P5-201ENST00000448802 534 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RN7SL552P-201ENST00000462094 276 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC021678.1-201ENST00000505195 936 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC113367.2-201ENST00000505749 160 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC079140.3-201ENST00000511111 550 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC022447.1-201ENST00000515358 464 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 CYCSP25-201ENST00000525280 316 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AP002963.1-201ENST00000530590 184 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC090888.3-201ENST00000558917 509 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 HSPE1P3-201ENST00000559254 309 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC107027.3-201ENST00000565095 3473 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL078601.3-201ENST00000573303 535 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RN7SL208P-201ENST00000577964 296 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 SMIM12P1-201ENST00000603004 274 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC112187.2-201ENST00000604345 283 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC100793.4-201ENST00000613683 429 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL445647.2-201ENST00000615170 130 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 OR1N1-202ENST00000619659 939 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RNU6-156P-201ENST00000621869 107 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC016583.1-201ENST00000624221 2431 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AL359740.1-201ENST00000624340 592 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC114546.4-201ENST00000624413 369 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 U6.101-201ENST00000637707 76 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AC005618.1-201ENST00000606901 3148 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL033543.1-201ENST00000623440 13454 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL451142.2-201ENST00000429076 2090 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL031119.1-201ENST00000404707 1879 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL603750.1-201ENST00000624216 1717 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL590763.1-201ENST00000398297 1545 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL158152.1-201ENST00000602652 1435 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 SAMMSON-210ENST00000641260 1308 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 RN7SKP237-201ENST00000364663 301 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL049697.3-201ENST00000406493 982 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 VN1R8P-201ENST00000407739 893 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 CDK8P2-201ENST00000415020 547 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 VN1R20P-201ENST00000425215 966 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 GAPDHP59-201ENST00000435908 267 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 RPL12P46-201ENST00000436610 195 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 AC239367.2-201ENST00000447309 705 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 RPL7P22-201ENST00000466005 733 ntBASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.13□□□□□ -1.27
TRAIPQ9BWF2 PFN1P8-201ENST00000497012 543 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms