Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 AC105749.1-201ENST00000631338 2008 ntBASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 ZNF37BP-203ENST00000452306 1352 ntBASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.16□□□□□ -1.42
UBE3DQ7Z6J8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MTND5P23-201ENST00000430812 1655 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 STAG3L4-201ENST00000352103 530 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 Y_RNA.25-201ENST00000362528 102 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 Y_RNA.97-201ENST00000363094 102 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 Y_RNA.160-201ENST00000363677 92 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 SNORA62.2-201ENST00000364672 152 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 SNORA51.12-201ENST00000384448 134 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 RNU2-65P-201ENST00000410162 185 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 RN7SKP129-201ENST00000410288 299 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AL596448.1-201ENST00000415024 392 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 NIPA2P1-201ENST00000426223 976 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC073464.1-201ENST00000429823 534 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 RPL7P4-203ENST00000430239 730 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 LDHAP2-201ENST00000437325 985 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC023598.1-201ENST00000472521 361 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC015524.1-201ENST00000491585 472 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MTND6P8-201ENST00000503471 522 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 KCTD9P5-201ENST00000504141 1170 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC022447.3-201ENST00000506865 495 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 LRRC34P2-201ENST00000514850 553 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 SCARNA15.1-201ENST00000516384 125 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC027309.2-201ENST00000520566 192 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 OR5AP1P-201ENST00000529730 940 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC073916.1-201ENST00000545095 130 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 TRAV15-201ENST00000556680 249 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 BNIP3P11-201ENST00000603878 563 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 PRELID3BP8-201ENST00000604148 295 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC115286.1-201ENST00000604298 434 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MIR6503-201ENST00000622884 86 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AP002505.2-201ENST00000623585 696 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 FRG1KP-201ENST00000623592 341 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 LINC02495-203ENST00000636704 242 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 MIR1321-201ENST00000637766 79 ntBASIC6.15□□□□□ -1.42
UBE3DQ7Z6J8 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UBE3DQ7Z6J8 AL121950.1-201ENST00000624993 2077 ntBASIC6.14□□□□□ -1.43
UBE3DQ7Z6J8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms