Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 SNORA73.2-201ENST00000364946 201 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 MIR1289-1-201ENST00000408836 144 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 RAB9AP3-201ENST00000412737 573 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 RAB9AP1-201ENST00000449393 573 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 OR4A15-201ENST00000314706 1035 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RNU1-20P-201ENST00000363314 162 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RNU1-63P-201ENST00000383902 164 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RPL21P65-201ENST00000406094 466 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC068533.1-201ENST00000418542 415 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 RN7SL429P-201ENST00000479090 223 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RN7SL489P-201ENST00000486185 223 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RN7SL327P-201ENST00000488659 223 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC111000.6-201ENST00000514471 709 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC099522.1-202ENST00000514718 367 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 Z95327.3-201ENST00000610385 572 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 RN7SL853P-201ENST00000617250 223 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC016588.2-201ENST00000632484 3021 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 UBBP2-201ENST00000376781 231 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC104849.1-201ENST00000462623 405 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RPS27AP17-201ENST00000463344 455 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 RPL23AP53-201ENST00000521854 457 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 CCDC162P-202ENST00000368966 6751 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 NACA-203ENST00000454682 6629 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 OR8F1P-201ENST00000425243 930 ntBASIC3.53□□□□□ -1.84
VPS13CQ709C8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS13CQ709C8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS13CQ709C8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VPS13CQ709C8 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC3.53□□□□□ -1.85
VPS13CQ709C8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 OR52E6-202ENST00000379946 954 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 Z74021.1-201ENST00000423610 407 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC092162.1-201ENST00000432828 434 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC074250.1-201ENST00000511117 192 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 DUXAP2-201ENST00000519198 589 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC105233.3-201ENST00000531125 744 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 Z98200.1-201ENST00000607298 470 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 ENSAP1-201ENST00000392855 326 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms