Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MRPL53P1-201ENST00000414323 319 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC009302.1-201ENST00000417147 390 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 BX284632.2-201ENST00000421091 399 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 TUBB4BP6-201ENST00000437576 479 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC002542.1-201ENST00000440683 193 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL512605.1-202ENST00000441919 381 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL359955.2-201ENST00000445380 353 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 IGBP1P3-201ENST00000447449 1000 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC007327.1-201ENST00000447461 264 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 EEF1B2P3-201ENST00000447718 678 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC243772.1-201ENST00000451620 410 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 RANP1-206ENST00000455094 651 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC091959.2-201ENST00000477363 321 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC126121.1-201ENST00000482313 553 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 RN7SL57P-201ENST00000493687 290 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC084024.2-201ENST00000503480 791 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC092349.1-201ENST00000504903 310 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 OR5H7P-201ENST00000514084 930 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 FABP5P12-201ENST00000515543 389 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 SCARNA18.1-201ENST00000516330 83 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 TMEM97P2-201ENST00000517841 403 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 WBP1LP3-201ENST00000523033 208 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 PMS2P3-207ENST00000529061 717 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 NMNAT1P5-201ENST00000559657 841 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC096996.1-201ENST00000563813 325 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MIR5708-201ENST00000579723 85 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MIR548Y-201ENST00000582739 110 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC008507.3-201ENST00000585753 472 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AP001542.2-201ENST00000593141 364 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC110760.3-201ENST00000598794 467 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL158042.1-201ENST00000605338 460 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MIR6793-201ENST00000612376 63 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 U6.107-201ENST00000637108 79 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 OR8B1P-202ENST00000641132 1178 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 Z98755.1-201ENST00000407015 1384 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 AC138393.1-206ENST00000540997 1886 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 COX6B1P3-201ENST00000312310 260 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 U3.7-201ENST00000363668 216 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 MORF4L1P6-201ENST00000418771 268 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 AC016907.1-201ENST00000419483 435 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 PTP4A1P5-201ENST00000420305 455 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 USP9YP26-201ENST00000421008 661 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 OR6K4P-201ENST00000423179 955 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 RIMKLBP2-201ENST00000424737 654 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 AC073143.1-201ENST00000436316 395 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 RPL7P29-201ENST00000437151 728 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 VN1R110P-201ENST00000438988 971 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 AL450263.2-201ENST00000439400 589 ntBASIC5.11□□□□□ -1.59
PTCHD4Q6ZW05 RPS26P30-201ENST00000443431 335 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms