Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC092451.2-201ENST00000538746 658 ntBASIC5.61□□□□□ -1.51
PDS5AQ29RF7 AC068831.4-201ENST00000556118 109 ntBASIC5.61□□□□□ -1.51
PDS5AQ29RF7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.61□□□□□ -1.51
PDS5AQ29RF7 AC009032.1-201ENST00000617574 431 ntBASIC5.61□□□□□ -1.51
PDS5AQ29RF7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PDS5AQ29RF7 AL672167.1-204ENST00000641875 3017 ntBASIC5.61□□□□□ -1.51
PDS5AQ29RF7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PDS5AQ29RF7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDS5AQ29RF7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.61□□□□□ -1.51
PDS5AQ29RF7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AL359922.3-201ENST00000624779 1670 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 RN7SKP74-201ENST00000362849 309 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 Y_RNA.110-201ENST00000363220 99 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 OR1F12-201ENST00000402365 945 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC007064.3-201ENST00000422608 359 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 OR5M12P-201ENST00000423388 929 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 RPL12P34-201ENST00000424532 479 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 CR848007.2-201ENST00000424918 787 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC009643.1-201ENST00000532030 391 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 MTND4LP25-201ENST00000570218 163 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC012409.3-201ENST00000611343 981 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AL133243.1-201ENST00000614487 366 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 RAD17P1-201ENST00000418130 2042 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC000374.1-201ENST00000434698 1745 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 AC026951.1-201ENST00000559530 2459 ntBASIC5.6□□□□□ -1.51
PDS5AQ29RF7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDS5AQ29RF7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AL445487.1-201ENST00000415694 1580 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 RNU4-39P-201ENST00000362455 127 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 RNU6-670P-201ENST00000364312 104 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC136624.1-201ENST00000400791 413 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AL139039.2-201ENST00000407436 479 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 HSPE1P16-201ENST00000426640 348 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC004938.1-201ENST00000438468 308 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC098799.3-201ENST00000506095 438 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 SNORA26.10-201ENST00000516427 141 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 RN7SKP5-201ENST00000517045 272 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AP000240.1-201ENST00000609910 452 ntBASIC5.59□□□□□ -1.51
PDS5AQ29RF7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.59□□□□□ -1.51
PDS5AQ29RF7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDS5AQ29RF7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.59□□□□□ -1.52
PDS5AQ29RF7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDS5AQ29RF7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.59□□□□□ -1.52
PDS5AQ29RF7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 Y_RNA.62-201ENST00000362840 99 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 MIR659-201ENST00000384963 97 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AL732292.1-201ENST00000426692 226 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 Z95152.1-201ENST00000453556 656 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 ISCUP1-201ENST00000454451 448 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 NDUFA5P9-201ENST00000472609 340 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC090686.1-201ENST00000481577 749 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 MTND3P3-201ENST00000505004 126 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 OR8A2P-201ENST00000528631 952 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC122134.1-202ENST00000569111 1201 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms