Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AP003170.5-201ENST00000397185 335 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHB3P54753 AL512430.2-201ENST00000406786 339 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC116036.1-201ENST00000412199 367 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHB3P54753 XKRYP4-201ENST00000414395 483 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC017078.1-201ENST00000416146 368 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 FNDC3CP-201ENST00000420795 1155 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 ISCA1P1-201ENST00000426679 387 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC016027.5-201ENST00000427227 210 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 MRPS21P3-201ENST00000436696 262 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 XKRYP5-201ENST00000449659 483 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AMD1P1-201ENST00000457220 922 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 RPS17P15-201ENST00000475609 349 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC104090.1-201ENST00000506341 1171 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 OR8Q1P-201ENST00000526467 655 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHB3P54753 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 ANP32BP3-201ENST00000559213 706 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC090651.1-201ENST00000567865 634 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 MIR4301-201ENST00000577203 66 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC012254.4-201ENST00000588843 273 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 MIR132-201ENST00000591554 101 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC091805.2-201ENST00000603848 235 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AL589674.2-201ENST00000604304 337 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 BX323046.1-201ENST00000610145 535 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC007497.1-201ENST00000610421 561 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 MIR6826-201ENST00000617808 98 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC126177.8-201ENST00000618339 1015 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC072046.2-201ENST00000618366 268 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 AC139769.3-201ENST00000618383 175 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC016717.3-201ENST00000624730 554 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.16□□□□□ -1.42
EPHB3P54753 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
EPHB3P54753 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
EPHB3P54753 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
EPHB3P54753 RARSP1-201ENST00000542842 1418 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 AP000547.3-204ENST00000588548 2523 ntBASIC6.16□□□□□ -1.42
EPHB3P54753 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
EPHB3P54753 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHB3P54753 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHB3P54753 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EPHB3P54753 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EPHB3P54753 RNU4-76P-201ENST00000364509 141 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 SNORA75-201ENST00000384158 137 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 RNU6-1200P-201ENST00000384162 107 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 OR3A2-201ENST00000408891 1076 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC245052.5-201ENST00000416320 649 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHB3P54753 AL662874.1-201ENST00000426065 230 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 MTND4LP16-201ENST00000440828 295 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 USP9YP29-201ENST00000445112 563 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 AL162739.1-201ENST00000450606 307 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.15□□□□□ -1.42
EPHB3P54753 AC109486.1-201ENST00000486833 374 ntBASIC6.15□□□□□ -1.42
EPHB3P54753 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.15□□□□□ -1.42
EPHB3P54753 OR5H5P-201ENST00000503164 928 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms