Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.95□□□□□ -1.62
HNF4AP41235 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.95□□□□□ -1.62
HNF4AP41235 NPM1P33-201ENST00000438918 872 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 GTF3AP5-201ENST00000442645 697 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 RPS6P2-201ENST00000454208 705 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 AC079841.1-201ENST00000481228 950 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 AC005412.2-201ENST00000492004 341 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 RN7SL441P-201ENST00000492388 296 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 COL6A4P2-205ENST00000509855 506 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.95□□□□□ -1.62
HNF4AP41235 IGLV2-28-201ENST00000520681 304 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.95□□□□□ -1.62
HNF4AP41235 NDUFB4P11-201ENST00000560510 395 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 AL390726.5-202ENST00000564800 256 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.95□□□□□ -1.62
HNF4AP41235 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.95□□□□□ -1.62
HNF4AP41235 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
HNF4AP41235 SUMO2P15-201ENST00000604285 278 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 RPL21P136-201ENST00000605378 396 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.95□□□□□ -1.62
HNF4AP41235 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.95□□□□□ -1.62
HNF4AP41235 BX005214.3-202ENST00000619809 325 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.95□□□□□ -1.62
HNF4AP41235 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 AL356094.1-201ENST00000624663 1212 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.95□□□□□ -1.62
HNF4AP41235 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HNF4AP41235 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HNF4AP41235 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 AC011447.7-201ENST00000624228 1590 ntBASIC4.95□□□□□ -1.62
HNF4AP41235 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HNF4AP41235 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 C4BPAP1-201ENST00000415474 1893 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
HNF4AP41235 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 SNORA17.1-201ENST00000362945 126 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 SNORA2.3-201ENST00000383920 135 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 RNU6-883P-201ENST00000384597 107 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 AL138785.1-201ENST00000425821 331 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AL139148.1-201ENST00000427122 680 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 HMGB3P21-201ENST00000452483 547 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 RN7SL443P-201ENST00000464331 290 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AC025181.1-201ENST00000477507 416 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AC008953.1-201ENST00000497334 318 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.94□□□□□ -1.62
HNF4AP41235 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 SCARNA21.2-201ENST00000516600 166 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AC026688.1-201ENST00000520639 1168 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC006518.1-201ENST00000541449 943 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 HMGB3P26-201ENST00000560051 582 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC233702.9-201ENST00000581528 203 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.94□□□□□ -1.62
HNF4AP41235 MIR4512-201ENST00000583257 77 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.94□□□□□ -1.62
HNF4AP41235 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 SUMO2P14-201ENST00000604488 293 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AC005972.3-201ENST00000606304 481 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 AC015802.5-201ENST00000607478 399 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms