Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HADHAP40939 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HADHAP40939 AC008432.1-201ENST00000615912 1320 ntBASIC5.23□□□□□ -1.57
HADHAP40939 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.22□□□□□ -1.57
HADHAP40939 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HADHAP40939 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 MIR16-2-201ENST00000362117 81 ntBASIC5.22□□□□□ -1.57
HADHAP40939 RNA5SP90-201ENST00000364801 99 ntBASIC5.22□□□□□ -1.57
HADHAP40939 RNU6-304P-201ENST00000364855 107 ntBASIC5.22□□□□□ -1.57
HADHAP40939 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 NUDT19P3-201ENST00000404698 555 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AL512430.2-201ENST00000406786 339 ntBASIC5.22□□□□□ -1.57
HADHAP40939 SPTLC1P2-201ENST00000407089 121 ntBASIC5.22□□□□□ -1.57
HADHAP40939 RN7SKP247-201ENST00000411094 308 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 AC048351.1-201ENST00000420064 602 ntBASIC5.22□□□□□ -1.57
HADHAP40939 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.22□□□□□ -1.57
HADHAP40939 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.22□□□□□ -1.57
HADHAP40939 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.22□□□□□ -1.57
HADHAP40939 RPS24P8-201ENST00000431490 402 ntBASIC5.22□□□□□ -1.57
HADHAP40939 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 AL353093.1-201ENST00000441292 436 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC108161.1-201ENST00000461060 402 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC111193.1-201ENST00000504097 155 ntBASIC5.22□□□□□ -1.57
HADHAP40939 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC112518.2-201ENST00000508565 425 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.22□□□□□ -1.57
HADHAP40939 BUD31P1-201ENST00000521828 359 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.22□□□□□ -1.57
HADHAP40939 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.22□□□□□ -1.57
HADHAP40939 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 HAUS8P1-201ENST00000549005 542 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.22□□□□□ -1.57
HADHAP40939 AC068714.1-201ENST00000559623 800 ntBASIC5.22□□□□□ -1.57
HADHAP40939 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC124283.4-201ENST00000581815 456 ntBASIC5.22□□□□□ -1.57
HADHAP40939 BNIP3P19-201ENST00000605397 577 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AL133445.2-201ENST00000611191 527 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 AC037198.3-201ENST00000616754 526 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AC016769.4-201ENST00000616893 535 ntBASIC5.22□□□□□ -1.57
HADHAP40939 uc_338.9-201ENST00000617424 182 ntBASIC5.22□□□□□ -1.57
HADHAP40939 MIR6719-201ENST00000622428 87 ntBASIC5.22□□□□□ -1.57
HADHAP40939 AP000943.4-201ENST00000622912 357 ntBASIC5.22□□□□□ -1.57
HADHAP40939 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.22□□□□□ -1.57
HADHAP40939 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.22□□□□□ -1.57
HADHAP40939 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HADHAP40939 GTF2H2B-203ENST00000508065 1432 ntBASIC5.22□□□□□ -1.57
HADHAP40939 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.22□□□□□ -1.57
HADHAP40939 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.21□□□□□ -1.57
HADHAP40939 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.21□□□□□ -1.57
HADHAP40939 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
HADHAP40939 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HADHAP40939 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HADHAP40939 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
HADHAP40939 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.21□□□□□ -1.57
HADHAP40939 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HADHAP40939 U3.3-201ENST00000362986 216 ntBASIC5.21□□□□□ -1.58
HADHAP40939 SNORA62.2-201ENST00000364672 152 ntBASIC5.21□□□□□ -1.58
HADHAP40939 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HADHAP40939 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.21□□□□□ -1.58
HADHAP40939 RNU4-27P-201ENST00000410889 139 ntBASIC5.21□□□□□ -1.58
HADHAP40939 MTCO3P4-201ENST00000419236 787 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 AL512637.2-201ENST00000431287 1256 ntBASIC5.21□□□□□ -1.58
HADHAP40939 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.21□□□□□ -1.58
HADHAP40939 RPL35AP21-201ENST00000437667 333 ntBASIC5.21□□□□□ -1.58
HADHAP40939 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 AC092013.1-201ENST00000438795 332 ntBASIC5.21□□□□□ -1.58
HADHAP40939 ELOCP10-201ENST00000440624 327 ntBASIC5.21□□□□□ -1.58
HADHAP40939 PTMAP3-201ENST00000447474 330 ntBASIC5.21□□□□□ -1.58
HADHAP40939 RPL7P55-201ENST00000450522 746 ntBASIC5.21□□□□□ -1.58
HADHAP40939 EIF4A1P11-201ENST00000451239 222 ntBASIC5.21□□□□□ -1.58
HADHAP40939 RPL23AP12-201ENST00000467573 473 ntBASIC5.21□□□□□ -1.58
HADHAP40939 NIFKP7-201ENST00000503365 834 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AC010627.1-201ENST00000503819 1294 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms