Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL136310.1-201ENST00000404926 654 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL512422.1-201ENST00000407033 553 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 PCNPP4-201ENST00000414817 517 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RAC1P8-201ENST00000427086 527 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 YWHAQP9-201ENST00000445891 512 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RHEBP2-201ENST00000450289 600 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC023141.9-201ENST00000458734 412 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC096992.1-201ENST00000459808 709 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RPL23AP71-201ENST00000470966 469 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RN7SL174P-201ENST00000475578 289 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL161747.1-201ENST00000480068 358 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RN7SL101P-201ENST00000496350 279 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC010285.3-201ENST00000511668 676 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL049872.1-201ENST00000556323 322 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 SNORD95-201ENST00000579879 68 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 CCDC58P3-201ENST00000590792 430 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 NANOGP3-201ENST00000605855 286 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AP000238.1-201ENST00000608759 426 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL445423.1-201ENST00000609941 536 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC079395.3-201ENST00000615161 484 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL121895.2-201ENST00000619558 447 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC011330.2-201ENST00000621680 635 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 CU639417.4-201ENST00000623928 207 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AP002967.1-201ENST00000624203 539 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC097655.1-201ENST00000635075 318 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC046144.1-201ENST00000478559 1853 ntBASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NECTIN3Q9NQS3 AC005261.4-201ENST00000600047 1385 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AC096921.1-201ENST00000411661 375 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 GAPDHP49-201ENST00000421421 961 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 CHEK2P5-201ENST00000423877 246 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AC073069.1-201ENST00000428657 441 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 PPIAP13-201ENST00000434706 478 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 RPL12P18-201ENST00000437175 325 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AC006335.2-201ENST00000437993 330 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 AC073052.1-201ENST00000440417 714 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 MTND1P26-201ENST00000440488 538 ntBASIC5.29□□□□□ -1.56
NECTIN3Q9NQS3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms