Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL591848.1-201ENST00000413092 322 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AC006065.1-201ENST00000422539 802 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 RPL12P28-201ENST00000430852 489 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 NUTF2P7-201ENST00000453086 375 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 RPL36AP41-201ENST00000493820 306 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 RPS4XP18-201ENST00000495480 763 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 MIR4675-201ENST00000577898 77 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AC115286.1-201ENST00000604298 434 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AL590392.1-201ENST00000604960 446 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AC016252.1-201ENST00000609721 474 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AP001273.1-201ENST00000624493 3152 ntBASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPAP1Q9BWH6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 AL445487.1-201ENST00000415694 1580 ntBASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPAP1Q9BWH6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 U3.22-201ENST00000391120 215 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC234779.1-201ENST00000425910 285 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AL732292.1-201ENST00000426692 226 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 NPM1P33-201ENST00000438918 872 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AL162591.2-201ENST00000449634 317 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 Z95152.1-201ENST00000453556 656 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC079168.2-201ENST00000453977 416 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 OR11I1P-201ENST00000486033 954 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC134698.5-201ENST00000519444 336 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 AC132825.8-201ENST00000640783 297 ntBASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RPAP1Q9BWH6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 RNA5SP447-201ENST00000363749 119 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC140479.3-201ENST00000418944 1126 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC007064.3-201ENST00000422608 359 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 GTF2IP2-201ENST00000424290 697 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC004938.1-201ENST00000438468 308 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 H2AFZP5-201ENST00000446960 382 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC020898.1-201ENST00000474167 787 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 RPL23AP37-201ENST00000479658 549 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC083829.1-201ENST00000503756 657 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC005962.2-201ENST00000611427 652 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AC004232.3-201ENST00000622977 525 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AL031119.1-201ENST00000404707 1879 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
RPAP1Q9BWH6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 AC009951.1-201ENST00000623674 2614 ntBASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPAP1Q9BWH6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms