Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 OR1S1-201ENST00000624470 978 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC027088.4-201ENST00000611559 1947 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC007938.2-201ENST00000604666 2634 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 DDX18P5-201ENST00000534547 1306 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 BX005019.1-201ENST00000561881 1810 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 AC093591.2-201ENST00000565254 3843 ntBASIC5.15□□□□□ -1.58
SNX18Q96RF0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.15□□□□□ -1.58
SNX18Q96RF0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNX18Q96RF0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 RNU6-353P-201ENST00000364266 108 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 SNORD116.1-201ENST00000365628 92 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL031985.1-201ENST00000392713 418 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL034374.1-201ENST00000406329 351 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC013404.1-201ENST00000413068 249 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 TRGV6-201ENST00000417928 299 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC234781.4-201ENST00000419384 244 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 PTP4A1P5-201ENST00000420305 455 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 RPP40P1-201ENST00000426762 456 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 MTCO1P52-201ENST00000433928 531 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 VN1R110P-201ENST00000438988 971 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL359265.1-201ENST00000440296 795 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL391987.1-201ENST00000441025 200 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 MYO5BP2-201ENST00000449815 1277 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 SEPT7P3-201ENST00000455017 621 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 NECAP1P2-201ENST00000455668 727 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 RNU7-140P-201ENST00000459546 60 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 RPS7P6-201ENST00000485777 579 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 MTATP6P1-201ENST00000514057 681 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 RNU6-1129P-201ENST00000515964 104 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 RNA5SP271-201ENST00000516700 88 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC027104.1-201ENST00000563702 681 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 MIR3614-201ENST00000581261 86 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 MIR4260-201ENST00000583107 67 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AP001269.3-201ENST00000588718 329 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL021707.7-201ENST00000607991 416 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 MIR6793-201ENST00000612376 63 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC011472.4-201ENST00000615848 491 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL158163.2-201ENST00000619110 700 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 AL035661.1-201ENST00000620459 1144 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC067852.7-201ENST00000623270 535 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC098679.4-201ENST00000624241 654 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 MIR4302-201ENST00000638058 60 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX18Q96RF0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SNX18Q96RF0 ADAM5-202ENST00000399789 1942 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 SEC63P2-201ENST00000503863 1939 ntBASIC5.15□□□□□ -1.59
SNX18Q96RF0 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms