Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SNORA51.1-201ENST00000363243 140 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 UBBP2-201ENST00000376781 231 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 RNU6-40P-201ENST00000384254 107 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC005522.1-201ENST00000395416 346 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 GJA6P-201ENST00000415117 1042 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 MTCYBP12-201ENST00000440559 1134 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 PSMC1P13-201ENST00000458195 985 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC092691.2-201ENST00000461787 803 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 RN7SL97P-201ENST00000486780 299 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC109462.1-201ENST00000491087 368 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC006499.3-201ENST00000506077 748 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC108120.2-201ENST00000512973 294 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC138938.1-201ENST00000515431 782 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 RNA5SP34-201ENST00000516887 130 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 OR10G5P-201ENST00000532733 358 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 AC008758.3-201ENST00000507003 1829 ntBASIC5.07□□□□□ -1.6
TRAF3IP1Q8TDR0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AL359922.3-201ENST00000624779 1670 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 TBCAP2-201ENST00000416175 326 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RPL36AP10-201ENST00000421785 322 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RHOT1P3-201ENST00000436571 331 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 CACYBPP1-201ENST00000438592 684 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC092647.3-201ENST00000443044 633 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC022431.1-201ENST00000450941 438 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RPL10P17-201ENST00000453852 316 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RPS6P2-201ENST00000454208 705 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AL591473.1-201ENST00000464297 313 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC021205.1-201ENST00000468797 348 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RPS26P39-201ENST00000469206 341 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RN7SKP147-201ENST00000517154 244 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 MTCO3P22-201ENST00000603219 784 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 MEMO1P5-201ENST00000604810 406 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 CR589904.2-201ENST00000612533 440 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 MIR6729-201ENST00000618194 65 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC022106.2-201ENST00000620114 757 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC01739-205ENST00000641890 573 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 CASC19-206ENST00000641028 1430 ntBASIC5.06□□□□□ -1.6
TRAF3IP1Q8TDR0 AC099654.2-201ENST00000433031 1980 ntBASIC5.05□□□□□ -1.6
TRAF3IP1Q8TDR0 SCN1A-220ENST00000641603 12506 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms