Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.62□□□□□ -1.51
CIITAP33076 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.62□□□□□ -1.51
CIITAP33076 RNA5SP230-201ENST00000517039 122 ntBASIC5.62□□□□□ -1.51
CIITAP33076 C1DP5-201ENST00000525775 383 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.62□□□□□ -1.51
CIITAP33076 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.62□□□□□ -1.51
CIITAP33076 AC021006.3-201ENST00000530771 192 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.62□□□□□ -1.51
CIITAP33076 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 AC006349.1-201ENST00000555526 235 ntBASIC5.62□□□□□ -1.51
CIITAP33076 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.62□□□□□ -1.51
CIITAP33076 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.62□□□□□ -1.51
CIITAP33076 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 AC023762.1-201ENST00000603280 584 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC011453.2-201ENST00000603737 729 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC104687.2-201ENST00000604442 342 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC005084.1-201ENST00000605160 304 ntBASIC5.62□□□□□ -1.51
CIITAP33076 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 AL135786.2-201ENST00000608422 615 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC019131.2-201ENST00000609071 870 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AL049794.2-201ENST00000616301 365 ntBASIC5.62□□□□□ -1.51
CIITAP33076 BX005214.3-202ENST00000619809 325 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AL445528.2-201ENST00000620582 470 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC004808.1-201ENST00000627671 721 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC099654.8-201ENST00000637757 681 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 AL606537.1-201ENST00000607258 2011 ntBASIC5.62□□□□□ -1.51
CIITAP33076 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CIITAP33076 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 RNU6-249P-201ENST00000363016 102 ntBASIC5.61□□□□□ -1.51
CIITAP33076 RNU4-7P-201ENST00000364758 141 ntBASIC5.61□□□□□ -1.51
CIITAP33076 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 AL133270.1-201ENST00000402635 279 ntBASIC5.61□□□□□ -1.51
CIITAP33076 GTF2IP5-201ENST00000414608 731 ntBASIC5.61□□□□□ -1.51
CIITAP33076 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 COX6B1P1-201ENST00000415962 213 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 RPS27P18-201ENST00000431701 247 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 CYCSP24-201ENST00000445119 316 ntBASIC5.61□□□□□ -1.51
CIITAP33076 OFD1P3Y-201ENST00000453312 783 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 RN7SL591P-201ENST00000496150 292 ntBASIC5.61□□□□□ -1.51
CIITAP33076 UBE2V1P12-201ENST00000503954 474 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 AC034244.2-201ENST00000514668 858 ntBASIC5.61□□□□□ -1.51
CIITAP33076 RNU6-334P-201ENST00000517072 102 ntBASIC5.61□□□□□ -1.51
CIITAP33076 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 RPL23AP53-201ENST00000521854 457 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.61□□□□□ -1.51
CIITAP33076 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 AL359219.2-201ENST00000555184 348 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 VPS35P1-201ENST00000563400 1518 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AC009712.1-201ENST00000564938 316 ntBASIC5.61□□□□□ -1.51
CIITAP33076 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.61□□□□□ -1.51
CIITAP33076 AC024940.4-201ENST00000605507 246 ntBASIC5.61□□□□□ -1.51
CIITAP33076 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.61□□□□□ -1.51
CIITAP33076 AC004241.3-201ENST00000611728 517 ntBASIC5.61□□□□□ -1.51
CIITAP33076 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CIITAP33076 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 AC007342.7-201ENST00000624610 2337 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 TMEM30CP-203ENST00000637814 1035 ntBASIC5.61□□□□□ -1.51
CIITAP33076 AL022322.2-201ENST00000624072 20397 ntBASIC5.61□□□□□ -1.51
CIITAP33076 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.61□□□□□ -1.51
CIITAP33076 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CIITAP33076 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 IRF5P1-201ENST00000504852 2164 ntBASIC5.6□□□□□ -1.51
CIITAP33076 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 SCARNA15-201ENST00000607520 4325 ntBASIC5.6□□□□□ -1.51
CIITAP33076 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms