Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB1Q9Y5F3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHB1Q9Y5F3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 DDX18P4-201ENST00000511690 1966 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC004656.1-201ENST00000568479 4951 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC006042.3-201ENST00000454684 1469 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 OR5H2-201ENST00000355273 945 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 Y_RNA.169-201ENST00000363745 96 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 RNU6-98P-201ENST00000384173 107 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 RNF10P1-201ENST00000418589 369 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 OR10T1P-201ENST00000424327 947 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 MOB1AP1-201ENST00000430903 535 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC234064.1-201ENST00000436312 247 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC012075.1-201ENST00000436549 580 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC009263.1-201ENST00000441193 1239 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 SPRYD7P1-201ENST00000443861 570 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AURKAPS1-201ENST00000451805 1212 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 ART2BP-201ENST00000453501 499 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 MTCO3P28-201ENST00000513351 515 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 BX510359.5-201ENST00000515651 304 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AP003461.1-201ENST00000528866 78 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 MIR5708-201ENST00000579723 85 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC025857.2-201ENST00000602711 238 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AL353778.1-201ENST00000603149 408 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 Z99497.2-201ENST00000603634 310 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AL592148.2-201ENST00000612210 372 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC007204.2-201ENST00000615022 616 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 CU639417.4-201ENST00000623928 207 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AP003497.2-201ENST00000624220 967 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PCDHB1Q9Y5F3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AL590763.1-201ENST00000398297 1545 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 SNORD116.1-201ENST00000365628 92 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 RNU6-83P-201ENST00000384568 112 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 SKINT1L-201ENST00000401057 817 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AP000534.2-201ENST00000412729 568 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AC009518.2-201ENST00000418056 731 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 TNPO1P1-201ENST00000423641 1138 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AL022331.1-201ENST00000429025 477 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 UBE2V1P1-201ENST00000430836 445 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AL365396.1-201ENST00000430854 671 ntBASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB1Q9Y5F3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms