Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 RNA5SP455-201ENST00000365190 119 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL592291.1-201ENST00000403830 352 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL121578.1-201ENST00000428051 892 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 OR7E125P-201ENST00000443450 846 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 NDUFA5P8-201ENST00000449019 346 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL162388.1-201ENST00000450912 352 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC090114.3-201ENST00000479267 829 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 RNA5SP43-201ENST00000516559 110 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC090819.1-201ENST00000523800 1111 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC092490.3-201ENST00000545370 572 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MIR4716-201ENST00000579628 84 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 TAS2R6P-201ENST00000605022 826 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AL137246.1-201ENST00000607072 977 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC017076.1-201ENST00000607613 578 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 LINC00901.1-201ENST00000617252 152 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MIR6826-201ENST00000617808 98 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MIR6886-201ENST00000619864 61 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 AC087565.3-202ENST00000642085 1603 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 ECM1P2-201ENST00000503354 1577 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL590763.1-201ENST00000398297 1545 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 U3.35-201ENST00000408405 208 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 RN7SKP222-201ENST00000410651 315 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL590806.1-201ENST00000415818 853 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC048351.1-201ENST00000420064 602 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 RGS17P1-201ENST00000423358 553 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC073069.1-201ENST00000428657 441 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 RPL12P28-201ENST00000430852 489 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL163193.1-201ENST00000444895 788 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC108751.2-201ENST00000469993 231 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 BX284632.1-201ENST00000478218 541 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 RNA5SP360-201ENST00000516555 118 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 HMGB1P19-201ENST00000517578 577 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC022832.1-201ENST00000530718 645 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 MIR3691-201ENST00000578066 90 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 MTCO2P22-201ENST00000603246 681 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC005377.1-201ENST00000605126 456 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL627230.1-201ENST00000613077 211 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL049794.2-201ENST00000616301 365 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL591926.8-201ENST00000616876 211 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC009318.3-201ENST00000616916 503 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC009951.1-201ENST00000623674 2614 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 AL034370.1-201ENST00000397254 1590 ntBASIC4.26□□□□□ -1.73
RHBDD3Q9Y3P4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms