Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RPS29P9-201ENST00000440360 171 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RSL24D1P2-201ENST00000445584 366 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AL354710.1-201ENST00000453641 246 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 SCARNA10-201ENST00000459255 330 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 APOOP2-201ENST00000461561 539 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RPS17P2-201ENST00000461663 408 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RPL7P6-201ENST00000480903 738 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 METTL15P1-201ENST00000481421 1045 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RPS21P4-201ENST00000487122 248 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC108751.5-201ENST00000492880 1336 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC012339.2-201ENST00000523996 453 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 MIR1273E-201ENST00000581165 102 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC009643.2-201ENST00000603543 1448 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AP005432.2-201ENST00000608162 586 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 RPSAP73-201ENST00000614820 330 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 ECM1P2-201ENST00000503354 1577 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 RN7SKP275-201ENST00000364626 301 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 SNORA67-201ENST00000384423 137 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 MIR195-201ENST00000385194 87 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 SNORA77-201ENST00000408716 125 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 RPS26P47-201ENST00000427219 348 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 NDUFA5P10-201ENST00000432147 357 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC245517.2-201ENST00000442890 346 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AL354714.3-201ENST00000447284 493 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AP002345.1-201ENST00000456493 928 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC100832.1-201ENST00000471945 383 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC104971.1-201ENST00000495117 578 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC010627.1-201ENST00000503819 1294 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC006499.4-201ENST00000510947 694 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6-941P-201ENST00000516346 108 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC123786.2-201ENST00000603459 275 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC010200.2-201ENST00000605098 235 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AL359091.2-201ENST00000609303 556 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC019206.1-201ENST00000621938 425 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC140113.4-201ENST00000622087 222 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC006453.5-201ENST00000636451 619 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 OR5AC4P-202ENST00000642086 985 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC011266.1-201ENST00000624119 3569 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 AC090017.1-201ENST00000548612 1779 ntBASIC4.07□□□□□ -1.76
KCNIP3Q9Y2W7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms