Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC000367.1-201ENST00000452711 1766 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC144833.1-201ENST00000567953 4089 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 RNA5SP326-201ENST00000363209 110 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 RNU4-40P-201ENST00000364351 143 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 SNORA11C-201ENST00000408532 129 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 MIR1303-201ENST00000408625 86 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 OR2AT2P-201ENST00000413438 905 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL008987.1-201ENST00000415528 237 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 ELOCP9-201ENST00000418624 239 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 RIMKLBP2-201ENST00000424737 654 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 OR5AW1P-201ENST00000426334 1006 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC009784.1-201ENST00000426484 460 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL359265.1-201ENST00000440296 795 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 SETD6P1-201ENST00000444575 317 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL450996.1-201ENST00000445574 1202 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL035551.1-201ENST00000446931 348 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL596266.1-201ENST00000448132 400 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL606490.1-201ENST00000452266 765 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 CBX1P2-201ENST00000453841 458 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 MTND2P14-201ENST00000482139 351 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC108471.1-201ENST00000513977 287 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 RNU6-615P-201ENST00000516065 106 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AGGF1P6-201ENST00000569213 976 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC108865.2-201ENST00000606881 432 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC099676.1-201ENST00000608886 657 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 AC099654.6-201ENST00000636487 512 ntBASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM54Q9BYV2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC104446.1-201ENST00000613728 1321 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 SNORA64.1-201ENST00000362600 132 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 OR52E6-202ENST00000379946 954 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 RNA5SP187-201ENST00000384400 119 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 MIR621-201ENST00000384919 96 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AL590290.1-201ENST00000405336 380 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC027644.1-201ENST00000419595 298 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC113412.1-201ENST00000425840 504 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 KCTD9P1-201ENST00000430462 1167 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 MOB1AP1-201ENST00000430903 535 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC007327.1-201ENST00000447461 264 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 RHEBP2-201ENST00000450289 600 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AL935212.3-201ENST00000450729 284 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC094085.1-201ENST00000468914 584 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC109481.1-201ENST00000509173 282 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 SEPT10P1-201ENST00000517342 1162 ntBASIC5.48□□□□□ -1.53
TRIM54Q9BYV2 CYCSP22-201ENST00000517555 339 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms