Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 DOCK11P1-201ENST00000553480 5932 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 MIR548AB-201ENST00000584917 84 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC020914.6-201ENST00000594327 272 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL022154.1-201ENST00000604698 785 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 IMMP1LP1-201ENST00000605170 488 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC090525.3-201ENST00000605601 189 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RPSAP75-201ENST00000605848 301 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL136984.1-201ENST00000607611 1893 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL159169.3-201ENST00000608871 561 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL135999.3-201ENST00000610501 812 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 CASC19-264ENST00000641912 1184 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 MTND5P26-201ENST00000426018 1752 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC130360.2-201ENST00000533477 1556 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC140479.2-201ENST00000421567 3130 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC103591.2-201ENST00000265259 766 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 STAG3L4-201ENST00000352103 530 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP514-201ENST00000363717 111 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP279-201ENST00000365513 117 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC007066.1-201ENST00000392902 381 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 RPL23AP47-201ENST00000408017 460 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 MIR1284-201ENST00000408337 120 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC068533.2-201ENST00000411872 306 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC092647.1-201ENST00000420654 287 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 OR8F1P-201ENST00000425243 930 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL365184.2-201ENST00000431139 435 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 MTND3P21-201ENST00000433774 331 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC118758.1-202ENST00000454719 225 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 SNX18P26-201ENST00000458433 740 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC090013.1-201ENST00000485147 480 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 KHDC1P1-201ENST00000511053 508 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AP002453.2-201ENST00000533503 320 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC073916.1-201ENST00000545095 130 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 CR383656.6-201ENST00000550518 394 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC009120.3-201ENST00000563335 499 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AL078601.3-201ENST00000573303 535 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC091193.1-201ENST00000604640 448 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 AC072046.2-201ENST00000618366 268 ntBASIC5.94□□□□□ -1.46
PTCHD1Q96NR3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms