Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 EEF1A1P40-201ENST00000412883 573 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 RPL18AP14-201ENST00000417685 526 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH1Q08174 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDH1Q08174 PGBD4P3-201ENST00000440731 581 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 RPS10P14-201ENST00000440748 502 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC092809.1-201ENST00000441469 474 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC239798.3-201ENST00000454459 408 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 BX322784.1-201ENST00000455793 1077 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC091544.1-201ENST00000484702 348 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDH1Q08174 OR5M14P-201ENST00000506803 618 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC091849.1-201ENST00000509920 121 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 MTND5P4-201ENST00000514978 288 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC130366.1-201ENST00000526505 1192 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 OR8A2P-201ENST00000528631 952 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC007068.2-201ENST00000543168 395 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
PCDH1Q08174 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC023310.2-201ENST00000553844 547 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 DPPA3P2-202ENST00000557188 1219 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH1Q08174 CYCSP2-201ENST00000558168 301 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC141257.3-201ENST00000572906 215 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 MIR3159-201ENST00000584572 74 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC009977.1-201ENST00000586015 570 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC008115.3-201ENST00000614874 549 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 FRG1KP-201ENST00000623592 341 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 MIR1321-201ENST00000637766 79 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
PCDH1Q08174 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDH1Q08174 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH1Q08174 AC010624.4-201ENST00000597606 1351 ntBASIC6.44□□□□□ -1.38
PCDH1Q08174 AC093311.1-201ENST00000506586 2021 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 AP002370.1-201ENST00000528055 1602 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
PCDH1Q08174 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
PCDH1Q08174 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC010329.1-201ENST00000593903 8328 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDH1Q08174 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 RNA5SP333-201ENST00000363466 118 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 RNA5SP334-201ENST00000364825 118 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 RNA5SP442-201ENST00000365050 107 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 MIR138-2-201ENST00000384916 84 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL356776.1-201ENST00000406574 447 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL451061.1-201ENST00000407887 862 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL139128.1-201ENST00000413921 941 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL359092.1-201ENST00000417156 265 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 NIPA2P1-201ENST00000426223 976 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 BX890604.2-201ENST00000427883 474 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AL358934.1-201ENST00000432346 324 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC104850.1-201ENST00000435940 476 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 CACYBPP1-201ENST00000438592 684 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 SLC31A1P1-201ENST00000451221 567 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 ST13P21-201ENST00000453250 1098 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 RBMY2EP-202ENST00000456360 940 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL133480.2-201ENST00000456723 487 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC117394.1-201ENST00000477323 567 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC015724.1-201ENST00000478577 156 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 ACTR3P3-201ENST00000480448 893 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC022447.3-201ENST00000506865 495 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL390198.2-201ENST00000510553 222 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms