Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.72□□□□□ -1.65
APOBEC1P41238 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.72□□□□□ -1.65
APOBEC1P41238 AL022067.1-201ENST00000602426 454 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 AC022467.1-201ENST00000614738 749 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.72□□□□□ -1.65
APOBEC1P41238 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.72□□□□□ -1.65
APOBEC1P41238 AC073569.3-201ENST00000619055 682 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 ZNF849P-201ENST00000594711 1566 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 CCT8P1-201ENST00000413611 1657 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APOBEC1P41238 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOBEC1P41238 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOBEC1P41238 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
APOBEC1P41238 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
APOBEC1P41238 Z95331.1-201ENST00000623075 23112 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
APOBEC1P41238 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APOBEC1P41238 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APOBEC1P41238 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOBEC1P41238 AC011493.1-201ENST00000596753 1632 ntBASIC4.72□□□□□ -1.65
APOBEC1P41238 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.72□□□□□ -1.65
APOBEC1P41238 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
APOBEC1P41238 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
APOBEC1P41238 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
APOBEC1P41238 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
APOBEC1P41238 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
APOBEC1P41238 U6.112-201ENST00000384129 70 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
APOBEC1P41238 MIR1182-201ENST00000408363 97 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AP000534.2-201ENST00000412729 568 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 COX5BP7-201ENST00000414780 274 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 OR52B5P-201ENST00000435337 951 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AL133244.1-201ENST00000456007 258 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 RPL7P48-201ENST00000461513 746 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC026414.1-201ENST00000504046 698 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.71□□□□□ -1.66
APOBEC1P41238 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC025260.1-201ENST00000548858 430 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.71□□□□□ -1.66
APOBEC1P41238 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC022884.2-201ENST00000578535 580 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.71□□□□□ -1.66
APOBEC1P41238 MIR548Y-201ENST00000582739 110 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 RN7SL622P-201ENST00000585292 275 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AP002906.1-201ENST00000603405 233 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AC093673.2-201ENST00000609674 331 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.71□□□□□ -1.66
APOBEC1P41238 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 OR52B5P-202ENST00000641118 1110 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC005005.4-201ENST00000623789 16698 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOBEC1P41238 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
APOBEC1P41238 VN2R3P-201ENST00000422626 1412 ntBASIC4.71□□□□□ -1.66
APOBEC1P41238 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.71□□□□□ -1.66
APOBEC1P41238 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.7□□□□□ -1.66
APOBEC1P41238 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.7□□□□□ -1.66
APOBEC1P41238 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.7□□□□□ -1.66
APOBEC1P41238 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
APOBEC1P41238 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
APOBEC1P41238 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
APOBEC1P41238 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 SNORA17.1-201ENST00000362945 126 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.7□□□□□ -1.66
APOBEC1P41238 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.7□□□□□ -1.66
APOBEC1P41238 RPL35AP24-201ENST00000413846 330 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.7□□□□□ -1.66
APOBEC1P41238 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.7□□□□□ -1.66
APOBEC1P41238 AC000041.1-201ENST00000439655 175 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 RRM2P4-201ENST00000441721 562 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
APOBEC1P41238 AL035407.2-201ENST00000454090 378 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.7□□□□□ -1.66
APOBEC1P41238 COPS8P2-201ENST00000473228 627 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 RPS4XP1-201ENST00000482189 787 ntBASIC4.7□□□□□ -1.66
APOBEC1P41238 RN7SL30P-201ENST00000488416 306 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms