Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 HSPA8P18-201ENST00000439846 1928 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN6P29350 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 RNA5SP305-201ENST00000362665 119 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 SNORA73.1-201ENST00000363107 205 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PTPN6P29350 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PTPN6P29350 AMZ2P2-201ENST00000406819 1057 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 EIF4A1P3-201ENST00000411521 244 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 TRGV6-201ENST00000417928 299 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 AC006455.6-201ENST00000426192 893 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN6P29350 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 IGHV5-78-201ENST00000450948 295 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 AL445433.1-201ENST00000457507 257 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 RN7SL329P-201ENST00000467740 299 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 AC004453.1-201ENST00000487895 408 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 ACTR6P1-201ENST00000514311 1104 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 RNU6-491P-201ENST00000516099 110 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 RN7SKP66-201ENST00000516681 231 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN6P29350 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN6P29350 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN6P29350 AC087763.1-201ENST00000603391 286 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 AC100814.1-201ENST00000606963 623 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN6P29350 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN6P29350 AL139254.3-201ENST00000641097 674 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
PTPN6P29350 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN6P29350 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN6P29350 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 OR51C1P-202ENST00000641159 1444 ntBASIC4.7□□□□□ -1.66
PTPN6P29350 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PTPN6P29350 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN6P29350 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
PTPN6P29350 SALL4P2-201ENST00000423288 2910 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PTPN6P29350 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 THAP12P4-201ENST00000528321 2266 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 SNURFL-201ENST00000309296 343 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 MIR421-201ENST00000365696 85 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 GSTA12P-201ENST00000402398 508 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.69□□□□□ -1.66
PTPN6P29350 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.69□□□□□ -1.66
PTPN6P29350 AL590806.1-201ENST00000415818 853 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 DDX39BP1-205ENST00000422507 192 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 EIF4HP2-201ENST00000424380 563 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN6P29350 RPS20P1-201ENST00000434853 354 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 CEACAMP7-201ENST00000444105 496 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AL031584.1-201ENST00000447169 754 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AL354714.3-201ENST00000447284 493 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 NDUFA5P8-201ENST00000449019 346 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 TCEA1P1-201ENST00000449716 880 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN6P29350 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN6P29350 AC093270.2-201ENST00000486157 792 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AC010350.1-201ENST00000504908 231 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AC013701.1-201ENST00000522657 465 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN6P29350 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN6P29350 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN6P29350 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN6P29350 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN6P29350 RNF138P2-201ENST00000603490 592 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.69□□□□□ -1.66
PTPN6P29350 AC004948.1-201ENST00000609858 672 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AP002799.1-201ENST00000623552 423 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 AC073429.2-201ENST00000569694 1444 ntBASIC4.69□□□□□ -1.66
PTPN6P29350 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PTPN6P29350 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN6P29350 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.69□□□□□ -1.66
PTPN6P29350 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN6P29350 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTPN6P29350 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 MAPK10-304ENST00000641341 3984 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms