Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 IGBP1P5-201ENST00000507524 1000 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 IGKV2D-10-201ENST00000520194 281 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 AC122134.1-201ENST00000565664 1104 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC009704.2-201ENST00000618739 483 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHRNA1P02708 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.21□□□□□ -1.58
CHRNA1P02708 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC009643.2-201ENST00000603543 1448 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
CHRNA1P02708 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNA1P02708 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 RNU6-1320P-201ENST00000390838 107 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 RNU6-1269P-201ENST00000391139 107 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNA1P02708 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AL591848.1-201ENST00000413092 322 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AC013470.3-201ENST00000420252 1194 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AC079168.2-201ENST00000453977 416 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 MTCYBP14-201ENST00000457471 715 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 RNU6-599P-201ENST00000459383 107 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 RNU6-1193P-201ENST00000459461 107 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 AC069304.1-201ENST00000491593 704 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA1P02708 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 NPM1P52-201ENST00000518264 846 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 AC084783.1-201ENST00000565846 910 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNA1P02708 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AC100847.1-201ENST00000611316 481 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 RNU6-368P-201ENST00000620928 107 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 RNU6-538P-201ENST00000622329 107 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 AP003499.2-201ENST00000624100 483 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 MIR6830-201ENST00000636015 70 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 OR52H1-202ENST00000641796 1061 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA1P02708 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA1P02708 TCP1P3-201ENST00000414406 1498 ntBASIC5.2□□□□□ -1.58
CHRNA1P02708 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA1P02708 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA1P02708 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA1P02708 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 UQCRBP1-201ENST00000421129 336 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 OR5M12P-201ENST00000423388 929 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AL451139.1-201ENST00000434718 346 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 RAB9AP5-201ENST00000437794 597 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 RAB9AP2-201ENST00000443911 597 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AC108463.1-201ENST00000450258 347 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA1P02708 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA1P02708 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 STRADBP1-201ENST00000478954 1281 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA1P02708 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA1P02708 RN7SKP122-201ENST00000515923 296 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AP001781.1-201ENST00000530977 207 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.19□□□□□ -1.58
CHRNA1P02708 AC069061.3-201ENST00000582254 823 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AC005191.1-201ENST00000603950 358 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.19□□□□□ -1.58
CHRNA1P02708 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 MLECP1-201ENST00000615893 709 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 AC004232.3-201ENST00000622977 525 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 THAP12P5-201ENST00000405864 2275 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 OR56B2P-202ENST00000641377 2453 ntBASIC5.19□□□□□ -1.58
CHRNA1P02708 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.19□□□□□ -1.58
CHRNA1P02708 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
CHRNA1P02708 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA1P02708 AC104260.2-201ENST00000623551 3497 ntBASIC5.18□□□□□ -1.58
CHRNA1P02708 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA1P02708 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA1P02708 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA1P02708 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms