Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CYCSP34-201ENST00000458172 304 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 RN7SL809P-201ENST00000482040 297 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 NPM1P28-201ENST00000492269 840 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDGFBP01127 SAP18P1-201ENST00000512058 390 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.02□□□□□ -1.61
PDGFBP01127 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFBP01127 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFBP01127 MIR3138-201ENST00000585238 82 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AC093227.2-201ENST00000589357 285 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AC005191.1-201ENST00000603950 358 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AC245389.1-201ENST00000605141 529 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 SOCS5P3-201ENST00000425115 1576 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 AC120338.1-201ENST00000625074 1541 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 AC010329.2-201ENST00000595195 2737 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 NCLP2-201ENST00000416078 1462 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PDGFBP01127 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
PDGFBP01127 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFBP01127 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PDGFBP01127 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFBP01127 AC009302.1-201ENST00000417147 390 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 AL590399.2-201ENST00000427536 309 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 AC016831.4-201ENST00000438302 307 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 SCAND3P1-201ENST00000439854 1060 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFBP01127 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFBP01127 EIF2S2P4-201ENST00000461070 984 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 SCARNA22-201ENST00000503991 125 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFBP01127 BTG4P1-201ENST00000510421 183 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 AC007016.1-201ENST00000512110 244 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFBP01127 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFBP01127 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFBP01127 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.01□□□□□ -1.61
PDGFBP01127 NPM1P35-201ENST00000533043 868 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFBP01127 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFBP01127 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFBP01127 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
PDGFBP01127 OR8B1P-202ENST00000641132 1178 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDGFBP01127 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 AC079097.1-201ENST00000512187 1399 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFBP01127 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFBP01127 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDGFBP01127 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFBP01127 AC004158.1-201ENST00000564508 4319 ntBASIC5.01□□□□□ -1.61
PDGFBP01127 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 SNORA2.3-201ENST00000383920 135 ntBASIC5□□□□□ -1.61
PDGFBP01127 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDGFBP01127 U3.30-201ENST00000391308 210 ntBASIC5□□□□□ -1.61
PDGFBP01127 AL136116.2-201ENST00000404020 785 ntBASIC5□□□□□ -1.61
PDGFBP01127 RNA5SP296-201ENST00000410523 111 ntBASIC5□□□□□ -1.61
PDGFBP01127 CEACAMP8-201ENST00000413902 580 ntBASIC5□□□□□ -1.61
PDGFBP01127 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 AC124944.2-201ENST00000429866 1242 ntBASIC5□□□□□ -1.61
PDGFBP01127 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 CASP3P1-201ENST00000446037 609 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms