Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC005077.1-201ENST00000449226 375 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 ANKRD26P4-201ENST00000455755 950 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RPS27AP2-201ENST00000457576 465 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC098847.1-201ENST00000473094 348 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RPS17P5-201ENST00000498293 408 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC025458.1-201ENST00000506046 166 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RNU6-1004P-201ENST00000516584 111 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RNA5SP230-201ENST00000517039 122 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AP003396.4-201ENST00000527574 265 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 NANOGNBP2-201ENST00000544753 553 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC084824.1-201ENST00000550917 1005 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 NBEAP1-201ENST00000554452 979 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC105129.3-201ENST00000605455 485 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 VN1R7P-201ENST00000619242 903 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC127024.6-201ENST00000621598 424 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AL136228.1-201ENST00000622221 319 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC018809.2-201ENST00000602436 3823 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 ELL2P3-201ENST00000457883 1602 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 NACA3P-201ENST00000359690 648 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RN7SKP186-201ENST00000365371 303 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RNU6-452P-201ENST00000384406 107 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RNA5SP284-201ENST00000384547 118 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC105402.1-201ENST00000413336 545 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 TCEA1P4-201ENST00000415066 844 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RPL7P53-201ENST00000421245 739 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 VN1R110P-201ENST00000438988 971 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AL353093.1-201ENST00000441292 436 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 LINC02210-201ENST00000444561 288 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MTCO2P7-201ENST00000446518 666 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR7E116P-201ENST00000448529 957 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MEMO1P4-201ENST00000453590 386 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 PSMC1P13-201ENST00000458195 985 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 SNORD125-201ENST00000459538 96 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RPL23AP37-201ENST00000479658 549 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RN7SL629P-201ENST00000489622 285 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR5H4P-201ENST00000510851 923 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 RNA5SP340-201ENST00000517132 107 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC060775.1-201ENST00000518241 520 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC079905.1-201ENST00000549280 475 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 405.2 ms