Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC093249.4-201ENST00000564755 259 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC008638.3-201ENST00000603341 463 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AL008729.2-201ENST00000606393 473 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 Mico1.1-201ENST00000611698 204 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 MAPK10-263ENST00000641052 4307 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC011503.2-201ENST00000594230 1500 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AL136164.3-201ENST00000624429 3978 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
CCDC112Q8NEF3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC112Q8NEF3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CCDC112Q8NEF3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC112Q8NEF3 AL355852.1-201ENST00000454081 1771 ntBASIC5.15□□□□□ -1.58
CCDC112Q8NEF3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC112Q8NEF3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 RNA5SP443-201ENST00000363083 132 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 Z97832.1-201ENST00000402490 328 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 MAPRE1P3-201ENST00000435438 796 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC073648.4-201ENST00000442655 781 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 NDUFA5P8-201ENST00000449019 346 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 RN7SL244P-201ENST00000493405 297 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC013701.1-201ENST00000522657 465 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC008966.2-201ENST00000606157 453 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 MIR6798-201ENST00000612887 67 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AL353726.1-201ENST00000614041 1000 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 AC015660.5-201ENST00000623238 564 ntBASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC112Q8NEF3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AL031119.1-201ENST00000404707 1879 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 U3.2-201ENST00000362981 210 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 MIR585-201ENST00000384887 94 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 MIR93-201ENST00000385024 80 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 CHMP1B2P-201ENST00000399581 597 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RNA5SP104-201ENST00000410989 118 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AF186996.5-201ENST00000418098 904 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC004552.1-201ENST00000419089 348 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 GLUD1P9-201ENST00000420997 1173 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RPL21P43-201ENST00000425440 472 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC006466.1-201ENST00000438721 289 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RPL34P20-201ENST00000442771 351 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC092647.3-201ENST00000443044 633 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RPL7P33-201ENST00000444159 742 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RPS26P3-201ENST00000470205 348 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC090543.2-201ENST00000483963 348 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC004057.1-201ENST00000485827 348 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 HMGN2P25-201ENST00000486956 268 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC025164.1-201ENST00000496249 478 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC008694.2-201ENST00000517591 306 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AP001922.4-201ENST00000526967 290 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 PCNPP1-201ENST00000552501 511 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms