Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPB1P53618 AL022393.1-201ENST00000625142 1677 ntBASIC5.63□□□□□ -1.51
COPB1P53618 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COPB1P53618 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.62□□□□□ -1.51
COPB1P53618 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.62□□□□□ -1.51
COPB1P53618 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COPB1P53618 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COPB1P53618 AL391361.1-201ENST00000405580 489 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AC013429.2-201ENST00000418798 781 ntBASIC5.62□□□□□ -1.51
COPB1P53618 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.62□□□□□ -1.51
COPB1P53618 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 COX6CP13-201ENST00000428703 226 ntBASIC5.62□□□□□ -1.51
COPB1P53618 MTND2P5-201ENST00000432656 1006 ntBASIC5.62□□□□□ -1.51
COPB1P53618 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 MTCYBP21-201ENST00000443300 1113 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.62□□□□□ -1.51
COPB1P53618 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 AL356981.1-201ENST00000454879 684 ntBASIC5.62□□□□□ -1.51
COPB1P53618 RPS17P11-201ENST00000474297 293 ntBASIC5.62□□□□□ -1.51
COPB1P53618 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.62□□□□□ -1.51
COPB1P53618 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 AC023424.1-201ENST00000496058 459 ntBASIC5.62□□□□□ -1.51
COPB1P53618 SUMO1P1-201ENST00000497904 306 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AC002456.2-201ENST00000509356 380 ntBASIC5.62□□□□□ -1.51
COPB1P53618 RNA5SP362-201ENST00000516048 118 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.62□□□□□ -1.51
COPB1P53618 OR8K4P-201ENST00000534608 872 ntBASIC5.62□□□□□ -1.51
COPB1P53618 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.62□□□□□ -1.51
COPB1P53618 AL132857.1-201ENST00000555180 708 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.62□□□□□ -1.51
COPB1P53618 AC104229.1-201ENST00000561364 255 ntBASIC5.62□□□□□ -1.51
COPB1P53618 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.62□□□□□ -1.51
COPB1P53618 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.62□□□□□ -1.51
COPB1P53618 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.62□□□□□ -1.51
COPB1P53618 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 AL022067.1-201ENST00000602426 454 ntBASIC5.62□□□□□ -1.51
COPB1P53618 SUMO2P15-201ENST00000604285 278 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AP002802.2-201ENST00000605877 235 ntBASIC5.62□□□□□ -1.51
COPB1P53618 AC211433.2-201ENST00000608433 387 ntBASIC5.62□□□□□ -1.51
COPB1P53618 Z95327.3-201ENST00000610385 572 ntBASIC5.62□□□□□ -1.51
COPB1P53618 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.62□□□□□ -1.51
COPB1P53618 AC004777.1-201ENST00000624317 287 ntBASIC5.62□□□□□ -1.51
COPB1P53618 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 AC074101.1-201ENST00000637861 241 ntBASIC5.62□□□□□ -1.51
COPB1P53618 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.62□□□□□ -1.51
COPB1P53618 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.62□□□□□ -1.51
COPB1P53618 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 ZNF90P1-201ENST00000480493 1951 ntBASIC5.62□□□□□ -1.51
COPB1P53618 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPB1P53618 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.62□□□□□ -1.51
COPB1P53618 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB1P53618 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB1P53618 RNU6-252P-201ENST00000363232 107 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC234772.1-201ENST00000377927 937 ntBASIC5.61□□□□□ -1.51
COPB1P53618 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
COPB1P53618 RNU6-207P-201ENST00000384137 107 ntBASIC5.61□□□□□ -1.51
COPB1P53618 RNU6-796P-201ENST00000391086 107 ntBASIC5.61□□□□□ -1.51
COPB1P53618 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPB1P53618 AL356317.1-201ENST00000396110 1436 ntBASIC5.61□□□□□ -1.51
COPB1P53618 ZNF602P-201ENST00000405929 924 ntBASIC5.61□□□□□ -1.51
COPB1P53618 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.61□□□□□ -1.51
COPB1P53618 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPB1P53618 AL592310.1-201ENST00000414330 671 ntBASIC5.61□□□□□ -1.51
COPB1P53618 UBE2V1P9-201ENST00000414760 368 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.61□□□□□ -1.51
COPB1P53618 MTND2P16-201ENST00000419987 799 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 GLUD1P9-201ENST00000420997 1173 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AL133325.1-201ENST00000421090 382 ntBASIC5.61□□□□□ -1.51
COPB1P53618 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB1P53618 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB1P53618 RPS4XP16-201ENST00000427198 791 ntBASIC5.61□□□□□ -1.51
COPB1P53618 CYCSP6-201ENST00000434498 302 ntBASIC5.61□□□□□ -1.51
COPB1P53618 RPS7P2-201ENST00000435134 607 ntBASIC5.61□□□□□ -1.51
COPB1P53618 CYCSP12-201ENST00000437729 300 ntBASIC5.61□□□□□ -1.51
COPB1P53618 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB1P53618 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 AL163193.1-201ENST00000444895 788 ntBASIC5.61□□□□□ -1.51
COPB1P53618 SNORD11.1-201ENST00000459482 85 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC091180.1-201ENST00000462104 372 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AL133445.1-201ENST00000467051 452 ntBASIC5.61□□□□□ -1.51
COPB1P53618 SIAH1P1-201ENST00000479411 923 ntBASIC5.61□□□□□ -1.51
COPB1P53618 RN7SL547P-201ENST00000490793 290 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB1P53618 AC119751.5-201ENST00000514077 770 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms