Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC087516.1-201ENST00000561236 2428 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC093671.1-201ENST00000624981 2929 ntBASIC6.99□□□□□ -1.29
LIG1P18858 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.99□□□□□ -1.29
LIG1P18858 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LIG1P18858 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LIG1P18858 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
LIG1P18858 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 AC073055.1-201ENST00000456901 1621 ntBASIC6.98□□□□□ -1.29
LIG1P18858 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.98□□□□□ -1.29
LIG1P18858 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
LIG1P18858 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 RNU6-500P-201ENST00000362349 107 ntBASIC6.98□□□□□ -1.29
LIG1P18858 RNU6-249P-201ENST00000363016 102 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AL035419.1-201ENST00000397037 564 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AL512430.2-201ENST00000406786 339 ntBASIC6.98□□□□□ -1.29
LIG1P18858 RN7SKP33-201ENST00000410942 340 ntBASIC6.98□□□□□ -1.29
LIG1P18858 PAICSP7-201ENST00000419829 962 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.98□□□□□ -1.29
LIG1P18858 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 RPL21P43-201ENST00000425440 472 ntBASIC6.98□□□□□ -1.29
LIG1P18858 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.98□□□□□ -1.29
LIG1P18858 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 AC112492.2-201ENST00000432774 1030 ntBASIC6.98□□□□□ -1.29
LIG1P18858 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.98□□□□□ -1.29
LIG1P18858 MTND1P30-201ENST00000441241 901 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AL645936.1-201ENST00000441979 518 ntBASIC6.98□□□□□ -1.29
LIG1P18858 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 AC093392.2-201ENST00000450682 337 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG1P18858 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC037198.2-201ENST00000478845 733 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC096751.1-202ENST00000502691 1067 ntBASIC6.98□□□□□ -1.29
LIG1P18858 TOMM22P4-201ENST00000511318 336 ntBASIC6.98□□□□□ -1.29
LIG1P18858 FABP5P5-201ENST00000515537 406 ntBASIC6.98□□□□□ -1.29
LIG1P18858 RNA5SP473-201ENST00000516402 125 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC024405.1-201ENST00000532521 1042 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG1P18858 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 RPS3AP4-201ENST00000555161 764 ntBASIC6.98□□□□□ -1.29
LIG1P18858 ZNF519P3-201ENST00000557158 1032 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG1P18858 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG1P18858 NPM1P42-201ENST00000560329 862 ntBASIC6.98□□□□□ -1.29
LIG1P18858 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 MIR4502-201ENST00000580432 81 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 AC134669.1-201ENST00000581275 672 ntBASIC6.98□□□□□ -1.29
LIG1P18858 SLC25A36P1-201ENST00000590111 465 ntBASIC6.98□□□□□ -1.29
LIG1P18858 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 AC013476.2-201ENST00000614456 459 ntBASIC6.98□□□□□ -1.29
LIG1P18858 uc_338.31-201ENST00000615595 186 ntBASIC6.98□□□□□ -1.29
LIG1P18858 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.98□□□□□ -1.29
LIG1P18858 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG1P18858 AC111152.1-202ENST00000635848 339 ntBASIC6.98□□□□□ -1.29
LIG1P18858 MFSD8-245ENST00000641743 948 ntBASIC6.98□□□□□ -1.29
LIG1P18858 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LIG1P18858 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 KYNUP3-201ENST00000574386 1341 ntBASIC6.98□□□□□ -1.29
LIG1P18858 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG1P18858 AL161756.3-201ENST00000641216 2071 ntBASIC6.97□□□□□ -1.29
LIG1P18858 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.97□□□□□ -1.29
LIG1P18858 RNU6-797P-201ENST00000363101 109 ntBASIC6.97□□□□□ -1.29
LIG1P18858 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 RNU2-66P-201ENST00000410650 161 ntBASIC6.97□□□□□ -1.29
LIG1P18858 RNU2-18P-201ENST00000411224 162 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.97□□□□□ -1.29
LIG1P18858 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 OR5AW1P-201ENST00000426334 1006 ntBASIC6.97□□□□□ -1.29
LIG1P18858 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 RPL12P16-201ENST00000431098 498 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.97□□□□□ -1.29
LIG1P18858 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.97□□□□□ -1.29
LIG1P18858 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 AL512593.1-201ENST00000444758 779 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC023271.1-201ENST00000445936 1090 ntBASIC6.97□□□□□ -1.29
LIG1P18858 ZNF619P1-201ENST00000446539 752 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms