Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 AP000926.3-201ENST00000497201 299 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.16□□□□□ -1.42
COL3A1P02461 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.16□□□□□ -1.42
COL3A1P02461 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.16□□□□□ -1.42
COL3A1P02461 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.16□□□□□ -1.42
COL3A1P02461 LSM3P2-201ENST00000551246 273 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.16□□□□□ -1.42
COL3A1P02461 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.16□□□□□ -1.42
COL3A1P02461 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.16□□□□□ -1.42
COL3A1P02461 AC025811.1-201ENST00000604312 472 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AL713998.2-201ENST00000604538 1198 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC097504.2-201ENST00000608088 454 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC009974.1-201ENST00000608881 455 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC140725.3-201ENST00000616193 880 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 Z99129.2-201ENST00000619967 314 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC011815.3-201ENST00000624194 473 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 AL731532.2-201ENST00000623542 1953 ntBASIC6.16□□□□□ -1.42
COL3A1P02461 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL3A1P02461 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL3A1P02461 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL3A1P02461 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
COL3A1P02461 AC010132.2-201ENST00000295493 1043 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AL358178.1-201ENST00000407698 397 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
COL3A1P02461 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.15□□□□□ -1.42
COL3A1P02461 HMGN2P27-201ENST00000427352 270 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 CNOT7P1-201ENST00000429006 852 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL3A1P02461 AL935212.3-201ENST00000450729 284 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AC009963.2-201ENST00000453431 138 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.15□□□□□ -1.42
COL3A1P02461 SNRPCP3-201ENST00000474888 476 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.15□□□□□ -1.42
COL3A1P02461 PPP1R11P1-201ENST00000486095 376 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.15□□□□□ -1.42
COL3A1P02461 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL3A1P02461 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.15□□□□□ -1.42
COL3A1P02461 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.15□□□□□ -1.42
COL3A1P02461 MTND1P24-201ENST00000552175 861 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.15□□□□□ -1.42
COL3A1P02461 IMMP1LP1-201ENST00000605170 488 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AC012409.3-201ENST00000611343 981 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AL049777.1-201ENST00000622740 518 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 AC010872.1-201ENST00000624225 675 ntBASIC6.15□□□□□ -1.42
COL3A1P02461 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL3A1P02461 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
COL3A1P02461 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL3A1P02461 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL3A1P02461 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.15□□□□□ -1.42
COL3A1P02461 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
COL3A1P02461 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.15□□□□□ -1.42
COL3A1P02461 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL3A1P02461 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL3A1P02461 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL3A1P02461 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL3A1P02461 RNA5SP151-201ENST00000365632 117 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AL050305.1-201ENST00000399993 1230 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 RPL6P21-201ENST00000418672 846 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.15□□□□□ -1.43
COL3A1P02461 RPL18P10-201ENST00000425606 538 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.15□□□□□ -1.43
COL3A1P02461 GTF3AP5-201ENST00000442645 697 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AC015908.1-201ENST00000478739 476 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 RPS3AP6-201ENST00000484430 795 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 BOLA3P3-201ENST00000505182 232 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.15□□□□□ -1.43
COL3A1P02461 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.15□□□□□ -1.43
COL3A1P02461 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.15□□□□□ -1.43
COL3A1P02461 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.15□□□□□ -1.43
COL3A1P02461 AC010503.3-201ENST00000594355 540 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AC146944.4-201ENST00000602697 718 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AC112220.2-201ENST00000605513 533 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AC018645.2-201ENST00000609151 472 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 MIR6891-201ENST00000618788 93 ntBASIC6.15□□□□□ -1.43
COL3A1P02461 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.15□□□□□ -1.43
COL3A1P02461 AP000432.2-201ENST00000624164 2048 ntBASIC6.14□□□□□ -1.43
COL3A1P02461 CPHL1P-201ENST00000461341 3407 ntBASIC6.14□□□□□ -1.43
COL3A1P02461 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL3A1P02461 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL3A1P02461 ICE2P1-201ENST00000512800 1849 ntBASIC6.14□□□□□ -1.43
COL3A1P02461 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL3A1P02461 OR51C1P-202ENST00000641159 1444 ntBASIC6.14□□□□□ -1.43
COL3A1P02461 RAD17P1-201ENST00000418130 2042 ntBASIC6.14□□□□□ -1.43
COL3A1P02461 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL3A1P02461 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms