Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 AC093799.1-201ENST00000452411 499 ntBASIC7.88□□□□□ -1.15
RNF40O75150 RN7SL791P-201ENST00000467868 295 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 NPM1P41-201ENST00000512920 831 ntBASIC7.88□□□□□ -1.15
RNF40O75150 RN7SKP295-201ENST00000517264 153 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AC009902.1-201ENST00000519351 183 ntBASIC7.88□□□□□ -1.15
RNF40O75150 PTP4A1P6-201ENST00000531034 478 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AC068305.2-201ENST00000550567 1205 ntBASIC7.88□□□□□ -1.15
RNF40O75150 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.88□□□□□ -1.15
RNF40O75150 AC013244.1-201ENST00000604279 193 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AL078624.2-201ENST00000605063 554 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AC231657.1-201ENST00000624313 397 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.88□□□□□ -1.15
RNF40O75150 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 MFSD8-227ENST00000641393 4069 ntBASIC7.88□□□□□ -1.15
RNF40O75150 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RNF40O75150 SOCS5P5-201ENST00000402732 1586 ntBASIC7.88□□□□□ -1.15
RNF40O75150 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.88□□□□□ -1.15
RNF40O75150 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.88□□□□□ -1.15
RNF40O75150 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RNF40O75150 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.88□□□□□ -1.15
RNF40O75150 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 AC012618.3-205ENST00000637896 1496 ntBASIC7.87□□□□□ -1.15
RNF40O75150 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 AC109780.1-201ENST00000451768 1344 ntBASIC7.87□□□□□ -1.15
RNF40O75150 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.87□□□□□ -1.15
RNF40O75150 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 RNU6-492P-201ENST00000363035 104 ntBASIC7.87□□□□□ -1.15
RNF40O75150 Y_RNA.339-201ENST00000365325 102 ntBASIC7.87□□□□□ -1.15
RNF40O75150 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 SET-203ENST00000372688 801 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 U3.23-201ENST00000391132 200 ntBASIC7.87□□□□□ -1.15
RNF40O75150 RNA5SP35-201ENST00000391257 129 ntBASIC7.87□□□□□ -1.15
RNF40O75150 H2AFZP3-201ENST00000394213 387 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AL034403.1-201ENST00000399414 885 ntBASIC7.87□□□□□ -1.15
RNF40O75150 RPS20P2-201ENST00000402520 389 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AL359634.1-202ENST00000404721 284 ntBASIC7.87□□□□□ -1.15
RNF40O75150 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AC127391.1-201ENST00000411737 98 ntBASIC7.87□□□□□ -1.15
RNF40O75150 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 AC114814.2-201ENST00000419195 485 ntBASIC7.87□□□□□ -1.15
RNF40O75150 DUTP6-201ENST00000425573 462 ntBASIC7.87□□□□□ -1.15
RNF40O75150 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RNF40O75150 AL669831.1-202ENST00000428504 417 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 GAPDHP34-201ENST00000432112 823 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 RPL21P110-201ENST00000433345 446 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 AC079193.1-201ENST00000460497 588 ntBASIC7.87□□□□□ -1.15
RNF40O75150 AC026254.2-201ENST00000475295 371 ntBASIC7.87□□□□□ -1.15
RNF40O75150 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.87□□□□□ -1.15
RNF40O75150 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.87□□□□□ -1.15
RNF40O75150 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.87□□□□□ -1.15
RNF40O75150 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.87□□□□□ -1.15
RNF40O75150 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RNF40O75150 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms