Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC011493.1-201ENST00000596753 1632 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 Y_RNA.465-201ENST00000384293 102 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 RNU6-77P-201ENST00000410554 91 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC093162.1-201ENST00000419682 124 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC108075.1-201ENST00000424692 529 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 FAM96AP1-201ENST00000430879 482 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 FGF7P5-201ENST00000441829 291 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC079922.1-201ENST00000443291 359 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL935212.3-201ENST00000450729 284 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL389915.2-201ENST00000454576 441 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 RN7SL346P-201ENST00000491561 294 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 NDUFB4P12-201ENST00000513465 390 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 RNU6-1129P-201ENST00000515964 104 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 PDCL2P2-201ENST00000533651 189 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC137768.1-201ENST00000549998 553 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AGGF1P7-201ENST00000562369 913 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC074050.1-201ENST00000563247 211 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC122134.1-201ENST00000565664 1104 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 MIR4433B-201ENST00000581329 102 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC012616.1-201ENST00000600294 197 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 MIR7973-1-201ENST00000614683 76 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AL118522.2-201ENST00000616045 615 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC004943.3-201ENST00000624116 600 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC018628.1-201ENST00000624147 3819 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 CASC19-206ENST00000641028 1430 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 DDX18P5-201ENST00000534547 1306 ntBASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCH2Q9Y6C5 AC006511.3-201ENST00000624929 1783 ntBASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCH2Q9Y6C5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 MTCO1P3-201ENST00000429327 192 ntBASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AL133217.1-201ENST00000450980 425 ntBASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 MRPL42P4-201ENST00000453267 443 ntBASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AC073522.1-201ENST00000483312 377 ntBASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 SNRPCP2-201ENST00000504370 475 ntBASIC6.46□□□□□ -1.38
PTCH2Q9Y6C5 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms