Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 AC104118.1-201ENST00000607625 1589 ntBASIC4.65□□□□□ -1.66
TREX1Q9NSU2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
TREX1Q9NSU2 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AL512430.2-201ENST00000406786 339 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 RN7SKP267-201ENST00000410381 285 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 VN1R54P-201ENST00000435210 1049 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 MTND4LP12-201ENST00000448237 295 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 HSPE1P22-201ENST00000456856 327 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 RNU2-30P-201ENST00000516209 141 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 RN7SKP276-201ENST00000516242 268 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 SOX5P1-201ENST00000524155 1127 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AC107918.3-201ENST00000533272 382 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AC044860.2-201ENST00000561005 179 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 CD24P2-201ENST00000565486 219 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AC090510.2-201ENST00000617465 629 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AC004232.3-201ENST00000622977 525 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 AC132825.1-201ENST00000463573 2247 ntBASIC4.65□□□□□ -1.67
TREX1Q9NSU2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
TREX1Q9NSU2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AL450326.2-201ENST00000421913 1962 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC107027.3-201ENST00000565095 3473 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AL645733.1-201ENST00000402250 217 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 SMC4P1-201ENST00000414479 527 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC016831.4-201ENST00000438302 307 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC018638.3-201ENST00000461273 132 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 RPS3AP41-201ENST00000462701 778 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 NIP7P2-201ENST00000485801 544 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 NDUFB5P1-201ENST00000508134 564 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 OR1F2P-201ENST00000570470 933 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC073091.2-201ENST00000603205 907 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 AC005084.1-201ENST00000605160 304 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 HSPD1P14-201ENST00000432666 1618 ntBASIC4.64□□□□□ -1.67
TREX1Q9NSU2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.64□□□□□ -1.67
TREX1Q9NSU2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 KARSP3-201ENST00000571212 1504 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AP001002.1-201ENST00000625148 1513 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.63□□□□□ -1.67
TREX1Q9NSU2 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 RPL21P91-201ENST00000429231 479 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 PPIAP13-201ENST00000434706 478 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 HMGB3P10-201ENST00000434734 572 ntBASIC4.63□□□□□ -1.67
TREX1Q9NSU2 AC092447.2-201ENST00000435487 669 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms