Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS8Q8N3P4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.01□□□□□ -1.29
VPS8Q8N3P4 AC009852.2-201ENST00000567898 485 ntBASIC7.01□□□□□ -1.29
VPS8Q8N3P4 RPL23AP97-201ENST00000568955 471 ntBASIC7.01□□□□□ -1.29
VPS8Q8N3P4 AL445423.1-201ENST00000609941 536 ntBASIC7.01□□□□□ -1.29
VPS8Q8N3P4 AC140479.6-201ENST00000633535 357 ntBASIC7.01□□□□□ -1.29
VPS8Q8N3P4 AL731566.1-201ENST00000620490 1937 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7□□□□□ -1.29
VPS8Q8N3P4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC7□□□□□ -1.29
VPS8Q8N3P4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VPS8Q8N3P4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 AC062016.2-201ENST00000420950 676 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 ARAFP1-201ENST00000422172 605 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 RPL23AP52-201ENST00000439311 478 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7□□□□□ -1.29
VPS8Q8N3P4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7□□□□□ -1.29
VPS8Q8N3P4 PRELID3BP5-201ENST00000508612 460 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7□□□□□ -1.29
VPS8Q8N3P4 AC020937.1-201ENST00000519677 1013 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC7□□□□□ -1.29
VPS8Q8N3P4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7□□□□□ -1.29
VPS8Q8N3P4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VPS8Q8N3P4 AC005086.4-201ENST00000623065 213 ntBASIC7□□□□□ -1.29
VPS8Q8N3P4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7□□□□□ -1.29
VPS8Q8N3P4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
VPS8Q8N3P4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 RNA5SP307-201ENST00000362863 116 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 SNORD96B-201ENST00000386148 79 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 C4BPAP2-201ENST00000428434 478 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 GSTA7P-201ENST00000438425 448 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AC012671.1-201ENST00000451912 203 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AC069366.1-201ENST00000583159 838 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AC103792.1-201ENST00000603591 919 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AC005034.4-201ENST00000603612 899 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AC113403.1-201ENST00000604910 193 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AL731566.2-201ENST00000618971 317 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 AP001002.1-201ENST00000625148 1513 ntBASIC6.99□□□□□ -1.29
VPS8Q8N3P4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
VPS8Q8N3P4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AC092017.2-201ENST00000427600 362 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 UBE2V1P3-201ENST00000439651 417 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 NDUFA5P9-201ENST00000472609 340 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AC041039.1-201ENST00000485656 536 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AC010476.1-201ENST00000519111 851 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 KPNA2P3-201ENST00000584190 848 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AC079587.1-201ENST00000603846 277 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 AL353726.1-201ENST00000614041 1000 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 LINC01808-202ENST00000641680 1116 ntBASIC6.98□□□□□ -1.29
VPS8Q8N3P4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
VPS8Q8N3P4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC097374.1-203ENST00000400783 485 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 SNRPFP1-201ENST00000414761 252 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC073143.1-201ENST00000436316 395 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 RPS27AP17-201ENST00000463344 455 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC083829.1-201ENST00000503756 657 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 MORF4L2P1-201ENST00000503761 858 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 HMGB2P1-201ENST00000591146 634 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AL354984.3-201ENST00000604803 325 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC012557.1-201ENST00000607115 611 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC005962.2-201ENST00000611427 652 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC011944.2-201ENST00000624440 683 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms