Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 PSAT1P4-201ENST00000466500 526 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 TPT1P3-201ENST00000492841 512 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 PPM1AP1-201ENST00000502740 1135 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 MTATP6P9-201ENST00000515039 680 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AC012400.1-201ENST00000518452 381 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 MIR4675-201ENST00000577898 77 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AC124283.4-201ENST00000581815 456 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 RN7SL356P-201ENST00000582228 248 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AC079610.2-201ENST00000604818 690 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AL627230.1-201ENST00000613077 211 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AL591926.8-201ENST00000616876 211 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AC024023.1-201ENST00000624530 922 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 OR9K1P-202ENST00000641111 3217 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 AC008432.1-201ENST00000615912 1320 ntBASIC5.69□□□□□ -1.5
HERC6Q8IVU3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HERC6Q8IVU3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC126755.2-208ENST00000327792 462 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC138969.1-213ENST00000331436 462 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RNA5SP505-201ENST00000364748 108 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 DBIP1-201ENST00000401435 260 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 MIR1182-201ENST00000408363 97 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RNU2-50P-201ENST00000410494 143 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 FO393419.3-201ENST00000428741 282 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 DNAJC19P7-201ENST00000428811 344 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 CYCSP42-201ENST00000450823 238 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AL513533.1-201ENST00000453728 415 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RN7SL354P-201ENST00000469282 294 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RN7SL188P-201ENST00000469842 285 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AP000797.2-201ENST00000475768 606 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC037198.2-201ENST00000478845 733 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RPS17P5-201ENST00000498293 408 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RNU5A-7P-201ENST00000515979 116 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 MTND5P21-201ENST00000531961 522 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AP006289.1-201ENST00000538089 277 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC097504.2-201ENST00000608088 454 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AP004607.9-201ENST00000618202 316 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC009704.2-201ENST00000618739 483 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AL590396.2-201ENST00000636511 1041 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AC135068.12-201ENST00000637370 931 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
HERC6Q8IVU3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HERC6Q8IVU3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC125336.1-201ENST00000508893 2827 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms