Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 RNU6-452P-201ENST00000384406 107 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 MIR600-201ENST00000385007 98 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 NPM1P40-201ENST00000412758 733 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 PCNPP4-201ENST00000414817 517 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AL357078.2-201ENST00000416486 427 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 EI24P4-201ENST00000423683 1078 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC023141.6-201ENST00000429418 337 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 RPL34P26-201ENST00000445636 354 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AL353718.1-201ENST00000451028 517 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 HMGB1P4-201ENST00000455362 567 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC009127.1-201ENST00000467090 155 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 METTL15P1-201ENST00000481421 1045 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC093890.1-201ENST00000502554 540 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC092490.3-201ENST00000545370 572 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC006363.1-201ENST00000603806 463 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC073592.7-201ENST00000623659 507 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 LINC01739-205ENST00000641890 573 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 AC006210.2-201ENST00000367074 1545 ntBASIC5.31□□□□□ -1.56
PRPF39Q86UA1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF39Q86UA1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC100778.3-201ENST00000580060 1750 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 ZNF90P1-201ENST00000480493 1951 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RNA5SP90-201ENST00000364801 99 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RNU6-185P-201ENST00000384421 107 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RPL6P29-201ENST00000414863 865 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 ARL2BPP3-201ENST00000421226 480 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 MTCO3P21-201ENST00000430791 643 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 ARL4AP4-201ENST00000434170 518 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC092647.3-201ENST00000443044 633 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 SUMO2P1-206ENST00000445436 284 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RPL23AP23-201ENST00000452590 471 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RN7SL809P-201ENST00000482040 297 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC025768.1-201ENST00000510057 267 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC134349.2-201ENST00000535136 910 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC006349.1-201ENST00000555526 235 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 MIR548Y-201ENST00000582739 110 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC011447.4-201ENST00000587562 111 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 KATNBL1P5-201ENST00000605015 517 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC133644.2-201ENST00000608142 540 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC116651.1-201ENST00000609724 556 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 CCT8P1-201ENST00000413611 1657 ntBASIC5.3□□□□□ -1.56
PRPF39Q86UA1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PRPF39Q86UA1 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC019072.1-201ENST00000604535 1551 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC068446.1-201ENST00000556425 1549 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF39Q86UA1 AC025574.1-201ENST00000554784 1653 ntBASIC5.29□□□□□ -1.56
PRPF39Q86UA1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms