Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HDAC4P56524 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HDAC4P56524 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC4P56524 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC4P56524 AC000123.3-201ENST00000624029 4975 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HDAC4P56524 OR8V1P-201ENST00000395193 873 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 NUDT19P3-201ENST00000404698 555 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 MIR1286-201ENST00000408112 78 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 RNU4-34P-201ENST00000410431 124 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 CTSL3P-202ENST00000412179 788 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 MTCO2P1-201ENST00000424648 477 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 AL161722.2-201ENST00000434731 981 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC4P56524 AL353898.1-201ENST00000444055 238 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 OR2AO1P-201ENST00000476497 403 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 AC037198.2-201ENST00000478845 733 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 RPL21P6-201ENST00000479171 504 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 NPM1P17-201ENST00000479221 602 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 RPL7AP10-201ENST00000481016 791 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 RPL7P39-201ENST00000481157 744 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 RNA5SP34-201ENST00000516887 130 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 MTCYBP19-201ENST00000517463 1124 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 AC012400.1-201ENST00000518452 381 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.42□□□□□ -1.54
HDAC4P56524 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.42□□□□□ -1.54
HDAC4P56524 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.42□□□□□ -1.54
HDAC4P56524 AC133794.1-201ENST00000602731 914 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 AL512329.2-201ENST00000607350 548 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 AC037198.3-201ENST00000616754 526 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 AC018445.2-201ENST00000622987 260 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 Z95327.2-201ENST00000414579 1873 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HDAC4P56524 SMG1P4-204ENST00000523028 4131 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 AP001642.1-201ENST00000624727 2117 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 HSPA8P19-201ENST00000505359 1517 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 MTND4P9-201ENST00000507819 1346 ntBASIC5.42□□□□□ -1.54
HDAC4P56524 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.42□□□□□ -1.54
HDAC4P56524 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC4P56524 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC4P56524 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDAC4P56524 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HDAC4P56524 ADAM5-202ENST00000399789 1942 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 HSPA8P18-201ENST00000439846 1928 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
HDAC4P56524 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDAC4P56524 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDAC4P56524 RNU6-31P-201ENST00000384388 108 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 MIR620-201ENST00000385232 95 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AL034374.1-201ENST00000406329 351 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 MIR1182-201ENST00000408363 97 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC4P56524 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC4P56524 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC4P56524 COX5BP7-201ENST00000414780 274 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC4P56524 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.41□□□□□ -1.54
HDAC4P56524 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC4P56524 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.41□□□□□ -1.54
HDAC4P56524 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC4P56524 GAPDHP58-201ENST00000438477 1006 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 RPS29P10-201ENST00000439197 166 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AL450263.2-201ENST00000439400 589 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.41□□□□□ -1.54
HDAC4P56524 RNF2P1-201ENST00000442955 1010 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.41□□□□□ -1.54
HDAC4P56524 HMGN1P5-201ENST00000448591 263 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 BX842559.2-201ENST00000451418 605 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 RPL23AP23-201ENST00000452590 471 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.41□□□□□ -1.54
HDAC4P56524 RN7SL799P-201ENST00000475891 298 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC4P56524 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.41□□□□□ -1.54
HDAC4P56524 AC097173.1-201ENST00000505862 819 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 MTATP6P9-201ENST00000515039 680 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 RPS27AP18-201ENST00000515536 459 ntBASIC5.41□□□□□ -1.54
HDAC4P56524 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.41□□□□□ -1.54
HDAC4P56524 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms