Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL445567.2-201ENST00000618935 498 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 SALL4P2-201ENST00000423288 2910 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL12P48061 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CXCL12P48061 NR1H5P-201ENST00000452683 1377 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL12P48061 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CXCL12P48061 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CXCL12P48061 AL359837.1-201ENST00000381357 287 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 OR1F12-201ENST00000402365 945 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 AL158827.1-201ENST00000416300 391 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 AC010740.1-201ENST00000417035 684 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL12P48061 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL12P48061 RPL7P19-201ENST00000469948 618 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 RN7SL604P-201ENST00000492589 296 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 RPL36AP41-201ENST00000493820 306 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 AC010476.1-201ENST00000519111 851 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL12P48061 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL12P48061 MED28P5-201ENST00000528254 438 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 PSMB7P1-201ENST00000556349 514 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 AC093249.4-201ENST00000564755 259 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 AC034105.4-201ENST00000568304 277 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 AC010487.1-201ENST00000594408 1172 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL12P48061 AC025857.2-201ENST00000602711 238 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 AC073137.1-201ENST00000605636 634 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 AL122126.1-201ENST00000546905 1318 ntBASIC4.7□□□□□ -1.66
CXCL12P48061 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL12P48061 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL12P48061 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL12P48061 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL12P48061 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 MFSD8-242ENST00000641690 4199 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CXCL12P48061 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL12P48061 AP000473.2-201ENST00000602659 1537 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 AC108463.1-201ENST00000450258 347 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 AC093166.2-201ENST00000455969 1017 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 AC105137.1-201ENST00000484355 562 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 AC091167.1-201ENST00000492017 396 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 AP000827.1-201ENST00000527814 258 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL12P48061 AC027369.5-201ENST00000533838 755 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.69□□□□□ -1.66
CXCL12P48061 AC105129.1-201ENST00000560250 297 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL12P48061 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL12P48061 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CXCL12P48061 AL023881.1-201ENST00000621088 301 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL12P48061 AP000542.2-201ENST00000623199 6179 ntBASIC4.69□□□□□ -1.66
CXCL12P48061 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL12P48061 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL12P48061 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL12P48061 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.68□□□□□ -1.66
CXCL12P48061 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms