Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 TPT1P1-201ENST00000458495 518 ntBASIC5.03□□□□□ -1.6
LDLRP01130 RPL23AP73-201ENST00000492507 471 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.03□□□□□ -1.6
LDLRP01130 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.03□□□□□ -1.6
LDLRP01130 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 AL390334.1-201ENST00000556395 450 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC084759.1-201ENST00000561168 290 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC233266.2-201ENST00000567067 528 ntBASIC5.03□□□□□ -1.6
LDLRP01130 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.03□□□□□ -1.6
LDLRP01130 AP005403.1-201ENST00000579720 229 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC011840.5-201ENST00000582125 771 ntBASIC5.03□□□□□ -1.6
LDLRP01130 MIR4697-201ENST00000582977 78 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC006116.3-201ENST00000592968 361 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 AF230666.2-201ENST00000602328 725 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC009027.1-201ENST00000604510 479 ntBASIC5.03□□□□□ -1.6
LDLRP01130 TAS2R6P-201ENST00000605022 826 ntBASIC5.03□□□□□ -1.6
LDLRP01130 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.03□□□□□ -1.6
LDLRP01130 AC242628.1-201ENST00000606810 391 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.03□□□□□ -1.6
LDLRP01130 AC017076.1-201ENST00000607613 578 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AP003400.3-201ENST00000624904 346 ntBASIC5.03□□□□□ -1.6
LDLRP01130 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDLRP01130 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
LDLRP01130 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.02□□□□□ -1.61
LDLRP01130 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.02□□□□□ -1.61
LDLRP01130 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LDLRP01130 U3.2-201ENST00000362981 210 ntBASIC5.02□□□□□ -1.61
LDLRP01130 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LDLRP01130 RNA5SP105-201ENST00000391123 113 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AL035419.1-201ENST00000397037 564 ntBASIC5.02□□□□□ -1.61
LDLRP01130 OR51A6P-201ENST00000418680 1004 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 MORF4L1P7-201ENST00000426038 703 ntBASIC5.02□□□□□ -1.61
LDLRP01130 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.02□□□□□ -1.61
LDLRP01130 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.02□□□□□ -1.61
LDLRP01130 VDAC2P4-201ENST00000452925 711 ntBASIC5.02□□□□□ -1.61
LDLRP01130 RNA5SP103-201ENST00000459503 118 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.02□□□□□ -1.61
LDLRP01130 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 SNRPCP2-201ENST00000504370 475 ntBASIC5.02□□□□□ -1.61
LDLRP01130 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.02□□□□□ -1.61
LDLRP01130 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.02□□□□□ -1.61
LDLRP01130 AC021146.7-201ENST00000509604 775 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.02□□□□□ -1.61
LDLRP01130 HMGN1P15-201ENST00000513870 295 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AC018442.3-201ENST00000523025 183 ntBASIC5.02□□□□□ -1.61
LDLRP01130 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 BNIP3P1-201ENST00000547295 580 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AC093014.1-201ENST00000548926 724 ntBASIC5.02□□□□□ -1.61
LDLRP01130 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.02□□□□□ -1.61
LDLRP01130 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.02□□□□□ -1.61
LDLRP01130 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 AC093510.2-201ENST00000562820 896 ntBASIC5.02□□□□□ -1.61
LDLRP01130 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.02□□□□□ -1.61
LDLRP01130 MIR4330-201ENST00000579077 105 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.02□□□□□ -1.61
LDLRP01130 AC015911.5-201ENST00000587076 451 ntBASIC5.02□□□□□ -1.61
LDLRP01130 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.02□□□□□ -1.61
LDLRP01130 AC124856.1-201ENST00000600819 896 ntBASIC5.02□□□□□ -1.61
LDLRP01130 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 AC004775.1-201ENST00000607389 753 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AC000068.2-201ENST00000608816 460 ntBASIC5.02□□□□□ -1.61
LDLRP01130 MIR1264-201ENST00000616374 69 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AL645927.2-201ENST00000618350 349 ntBASIC5.02□□□□□ -1.61
LDLRP01130 AP001005.3-201ENST00000622049 129 ntBASIC5.02□□□□□ -1.61
LDLRP01130 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 AL672167.1-204ENST00000641875 3017 ntBASIC5.02□□□□□ -1.61
LDLRP01130 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LDLRP01130 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.02□□□□□ -1.61
LDLRP01130 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms