Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRFN1Q9P244 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRFN1Q9P244 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRFN1Q9P244 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 YES1P1-201ENST00000418510 1628 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 RNU1-59P-201ENST00000364829 162 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 RPS3AP25-201ENST00000411660 793 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC211486.3-201ENST00000412694 621 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC092648.1-201ENST00000425870 423 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AL035246.1-201ENST00000433554 1255 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AL450996.1-201ENST00000445574 1202 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 EIF2S2P2-201ENST00000447161 982 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 RN7SL72P-201ENST00000460697 269 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC015724.1-201ENST00000478577 156 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC134050.1-201ENST00000495088 933 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC093720.1-201ENST00000505681 714 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC114786.1-201ENST00000512892 1415 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 GAPDHP62-201ENST00000515313 990 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 SNORA70.11-201ENST00000515987 138 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 SNORA70.13-201ENST00000516116 138 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 RNA5SP228-201ENST00000516232 133 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 IGKV2-18-201ENST00000522607 343 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC090424.1-201ENST00000535243 736 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 NIFKP8-201ENST00000560500 874 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC096996.1-201ENST00000563813 325 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC018552.3-201ENST00000567416 561 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 AP001542.2-201ENST00000593141 364 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC211433.2-201ENST00000608433 387 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AL138478.1-201ENST00000612252 832 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AL353726.1-201ENST00000614041 1000 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 U1.25-201ENST00000614085 162 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AC090607.5-201ENST00000615692 224 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 OR1S1-201ENST00000624470 978 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 AL109659.3-201ENST00000624985 950 ntBASIC5.27□□□□□ -1.57
LRFN1Q9P244 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.27□□□□□ -1.57
LRFN1Q9P244 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRFN1Q9P244 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRFN1Q9P244 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 AC239868.2-201ENST00000564237 4527 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRFN1Q9P244 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 AL512646.1-201ENST00000269395 1077 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 SNORD1C-201ENST00000363315 78 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 RNA5SP132-201ENST00000364725 118 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRFN1Q9P244 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 AL355433.1-201ENST00000422804 300 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 GTF2IP2-201ENST00000424290 697 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 FMO7P-201ENST00000436045 768 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 AC096775.1-201ENST00000437724 448 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.26□□□□□ -1.57
LRFN1Q9P244 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 OR7E116P-201ENST00000448529 957 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRFN1Q9P244 OSTCP1-201ENST00000455507 450 ntBASIC5.26□□□□□ -1.57
LRFN1Q9P244 RN7SL515P-201ENST00000463999 297 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms