Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNA5SP397-201ENST00000391323 118 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 RPS4XP9-201ENST00000405151 780 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 OR2AH1P-201ENST00000425717 928 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 AC111000.3-201ENST00000508057 576 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 AC020915.5-201ENST00000596836 964 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 RPL12P25-202ENST00000598100 674 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 AC018690.1-201ENST00000608144 626 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 MLECP1-201ENST00000615893 709 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 CCT8P1-201ENST00000413611 1657 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 MTCO1P15-201ENST00000529569 1526 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 TCP11X1-202ENST00000622971 1372 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL583835.1-201ENST00000399570 407 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 COX6CP17-201ENST00000421389 185 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 RPL21P43-201ENST00000425440 472 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC104651.2-201ENST00000447549 528 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL034374.2-201ENST00000605281 548 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 OR51H2P-202ENST00000641424 3046 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL591848.1-201ENST00000413092 322 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC017078.1-201ENST00000416146 368 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AL121878.1-201ENST00000418638 859 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC140479.3-201ENST00000418944 1126 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 NFYAP1-201ENST00000431953 972 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 TDGF1P1-201ENST00000445734 527 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC108751.2-201ENST00000469993 231 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 HMGB3P16-201ENST00000508037 287 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AP000919.1-201ENST00000582850 985 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC025574.1-201ENST00000554784 1653 ntBASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KIAA1549Q9HCM3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 RNA5SP447-201ENST00000363749 119 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 MIR1271-201ENST00000408537 86 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 RPL23AP93-201ENST00000440847 484 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 RPL21P126-201ENST00000470049 478 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 NIP7P2-201ENST00000485801 544 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AC083829.1-201ENST00000503756 657 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AC138701.1-201ENST00000524329 714 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AC093524.1-201ENST00000564266 1094 ntBASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms