Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX3Q99909 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX3Q99909 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX3Q99909 AC139697.1-201ENST00000548429 745 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX3Q99909 DYNLL1P4-201ENST00000549314 266 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AL512310.9-201ENST00000553311 948 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX3Q99909 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 AC084757.1-201ENST00000559987 490 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 DHFRP1-201ENST00000579682 559 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX3Q99909 AC092474.3-201ENST00000603022 568 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AL671309.1-201ENST00000603750 544 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AC007423.1-201ENST00000605009 627 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AL645927.2-201ENST00000618350 349 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AC005840.5-201ENST00000619166 599 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 AP006248.2-201ENST00000623309 592 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX3Q99909 CFTRP2-201ENST00000634304 199 ntBASIC4.5□□□□□ -1.69
SSX3Q99909 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSX3Q99909 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX3Q99909 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSX3Q99909 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX3Q99909 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX3Q99909 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.5□□□□□ -1.69
SSX3Q99909 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSX3Q99909 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 DDX18P4-201ENST00000511690 1966 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX3Q99909 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 AL049555.1-201ENST00000562834 1933 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 GAPDHP24-201ENST00000328713 983 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSX3Q99909 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSX3Q99909 RN7SKP199-201ENST00000410325 305 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC004690.1-201ENST00000418216 328 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 AL590762.3-201ENST00000436372 640 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 RANP1-206ENST00000455094 651 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC021660.1-201ENST00000465006 554 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 RN7SL177P-201ENST00000476596 299 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 RPS4XP14-201ENST00000493072 781 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC090638.1-201ENST00000498296 909 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.49□□□□□ -1.69
SSX3Q99909 ARL4AP1-201ENST00000503220 705 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.49□□□□□ -1.69
SSX3Q99909 IGLV2-28-201ENST00000520681 304 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 MTND2P7-201ENST00000521337 640 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC090819.1-201ENST00000523800 1111 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 PMS2P3-207ENST00000529061 717 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC093014.1-201ENST00000548926 724 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX3Q99909 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 CBX3P2-202ENST00000583365 535 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.49□□□□□ -1.69
SSX3Q99909 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC012616.1-201ENST00000600294 197 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 SUMO2P14-201ENST00000604488 293 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 KATNBL1P5-201ENST00000605015 517 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC073137.1-201ENST00000605636 634 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 AL512624.1-201ENST00000613638 469 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC007204.2-201ENST00000615022 616 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 MIR1264-201ENST00000616374 69 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX3Q99909 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 AC068446.1-201ENST00000556425 1549 ntBASIC4.49□□□□□ -1.69
SSX3Q99909 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.49□□□□□ -1.69
SSX3Q99909 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSX3Q99909 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSX3Q99909 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SSX3Q99909 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms