Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 RNA5SP92-201ENST00000516437 110 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC011270.1-201ENST00000558606 583 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC008759.1-201ENST00000589783 983 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC133552.5-201ENST00000604266 540 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AL391358.1-201ENST00000605342 190 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC091905.2-201ENST00000623143 306 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC091905.4-201ENST00000623432 202 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC016542.2-201ENST00000624201 619 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC132825.8-201ENST00000640783 297 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 AC135352.1-201ENST00000506173 1418 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 RN7SKP206-201ENST00000410823 293 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AL935212.3-201ENST00000450729 284 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 ISCUP1-201ENST00000454451 448 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 PSMC1P13-201ENST00000458195 985 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 RPL7AP10-201ENST00000481016 791 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC100770.1-201ENST00000532310 322 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC125612.1-201ENST00000547580 377 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 RN7SL652P-201ENST00000577769 300 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC023762.1-201ENST00000603280 584 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 AL353726.1-201ENST00000614041 1000 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC112694.2-201ENST00000623697 768 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AL590763.1-201ENST00000398297 1545 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC42Q96M95 AC017104.4-201ENST00000636283 1592 ntBASIC4.95□□□□□ -1.62
CCDC42Q96M95 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC42Q96M95 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC42Q96M95 RNA5SP151-201ENST00000365632 117 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC42Q96M95 Z98745.1-201ENST00000402553 494 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 FCF1P5-201ENST00000406490 482 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 AL139039.2-201ENST00000407436 479 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 RN7SKP267-201ENST00000410381 285 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 HMGB3P9-201ENST00000441799 583 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC073850.1-201ENST00000449243 255 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 snoU13.20-201ENST00000459180 104 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 RPL5P16-201ENST00000471467 790 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC090013.1-201ENST00000485147 480 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 SCARNA22-201ENST00000503991 125 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 LDHBP3-201ENST00000514909 822 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC134698.5-201ENST00000519444 336 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 HAUS8P1-201ENST00000549005 542 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 RN7SL176P-201ENST00000580352 264 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 ADAD1P2-201ENST00000588476 646 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC087763.1-201ENST00000603391 286 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 MIR6768-201ENST00000610734 72 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 AC006840.1-201ENST00000623069 542 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 MIR4302-201ENST00000638058 60 ntBASIC4.94□□□□□ -1.62
CCDC42Q96M95 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC42Q96M95 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms