Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MTCO3P35-201ENST00000485582 781 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC025459.1-201ENST00000504072 156 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 OR7H2P-201ENST00000513483 306 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 RN7SKP34-201ENST00000516142 244 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 MIR2117-201ENST00000516780 80 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC008033.2-201ENST00000542626 177 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL031320.1-201ENST00000604177 357 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC079610.2-201ENST00000604818 690 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC104985.3-201ENST00000623479 597 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AC004777.1-201ENST00000624317 287 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 THAP12P4-201ENST00000528321 2266 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 CASC19-260ENST00000641828 2001 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 OR9G4-201ENST00000302957 984 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 RNA5SP388-201ENST00000362584 119 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AL672167.2-201ENST00000377164 879 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 MIR23B-201ENST00000384832 97 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 RNA5SP91-201ENST00000390902 119 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 GLULP6-201ENST00000399502 913 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC116036.1-201ENST00000412199 367 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AL449283.1-202ENST00000418249 604 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 OR2AM1P-201ENST00000422137 422 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC021876.1-201ENST00000425959 359 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 CR769776.1-201ENST00000441254 787 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC093166.2-201ENST00000455969 1017 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC009127.1-201ENST00000467090 155 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 RPS27AP16-201ENST00000492222 470 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 BTG4P1-201ENST00000510421 183 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 NMNAT1P5-201ENST00000559657 841 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 MIR4737-201ENST00000583979 81 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC012254.4-201ENST00000588843 273 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AL583832.1-201ENST00000603227 784 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AP002906.1-201ENST00000603405 233 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AL109618.2-201ENST00000605527 211 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AP002791.1-201ENST00000623291 381 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC245100.2-201ENST00000454544 1679 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 AC011369.2-201ENST00000624423 1567 ntBASIC6.57□□□□□ -1.36
SMC1BQ8NDV3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMC1BQ8NDV3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms