Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 RNU4-7P-201ENST00000364758 141 ntBASIC4.93□□□□□ -1.62
CDH12P55289 RN7SKP153-201ENST00000365026 316 ntBASIC4.93□□□□□ -1.62
CDH12P55289 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH12P55289 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH12P55289 OR6E1P-201ENST00000414424 923 ntBASIC4.93□□□□□ -1.62
CDH12P55289 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
CDH12P55289 BMS1P17-202ENST00000416720 316 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.93□□□□□ -1.62
CDH12P55289 ETF1P3-201ENST00000430422 1160 ntBASIC4.93□□□□□ -1.62
CDH12P55289 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH12P55289 USP9YP24-201ENST00000434374 697 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH12P55289 USP9YP17-201ENST00000444617 696 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AL591719.1-201ENST00000444669 744 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH12P55289 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH12P55289 TRY2P-201ENST00000448860 689 ntBASIC4.93□□□□□ -1.62
CDH12P55289 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 GTF2IP12-201ENST00000456547 356 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC010627.1-201ENST00000503819 1294 ntBASIC4.93□□□□□ -1.62
CDH12P55289 SUMO2P4-201ENST00000504193 276 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH12P55289 SNORD46.2-201ENST00000516021 102 ntBASIC4.93□□□□□ -1.62
CDH12P55289 RN7SKP70-201ENST00000516655 271 ntBASIC4.93□□□□□ -1.62
CDH12P55289 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH12P55289 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH12P55289 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 AC109635.6-201ENST00000525487 1113 ntBASIC4.93□□□□□ -1.62
CDH12P55289 OR8I1P-201ENST00000529291 931 ntBASIC4.93□□□□□ -1.62
CDH12P55289 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH12P55289 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH12P55289 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH12P55289 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH12P55289 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 VN1R87P-201ENST00000596706 487 ntBASIC4.93□□□□□ -1.62
CDH12P55289 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 AC025811.1-201ENST00000604312 472 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC018618.2-201ENST00000604770 446 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC079610.2-201ENST00000604818 690 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC011374.2-201ENST00000607135 526 ntBASIC4.93□□□□□ -1.62
CDH12P55289 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 AL355493.4-201ENST00000618530 292 ntBASIC4.93□□□□□ -1.62
CDH12P55289 Z99129.2-201ENST00000619967 314 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC010435.1-201ENST00000623353 1177 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC132068.1-201ENST00000623805 459 ntBASIC4.93□□□□□ -1.62
CDH12P55289 CU639417.4-201ENST00000623928 207 ntBASIC4.93□□□□□ -1.62
CDH12P55289 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH12P55289 AC017104.5-201ENST00000637647 639 ntBASIC4.93□□□□□ -1.62
CDH12P55289 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 AL355578.1-201ENST00000607405 1328 ntBASIC4.93□□□□□ -1.62
CDH12P55289 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH12P55289 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CDH12P55289 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CDH12P55289 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.92□□□□□ -1.62
CDH12P55289 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH12P55289 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDH12P55289 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH12P55289 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 RN7SKP292-201ENST00000365522 317 ntBASIC4.92□□□□□ -1.62
CDH12P55289 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 RNA5SP122-201ENST00000384457 108 ntBASIC4.92□□□□□ -1.62
CDH12P55289 RNU6-932P-201ENST00000391108 106 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC233289.1-201ENST00000403700 508 ntBASIC4.92□□□□□ -1.62
CDH12P55289 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC092638.1-201ENST00000411966 1275 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC211486.3-201ENST00000412694 621 ntBASIC4.92□□□□□ -1.62
CDH12P55289 MTCO3P4-201ENST00000419236 787 ntBASIC4.92□□□□□ -1.62
CDH12P55289 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 RPL12P18-201ENST00000437175 325 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC002504.1-201ENST00000438281 691 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH12P55289 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH12P55289 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH12P55289 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH12P55289 MTCYBP11-201ENST00000447254 1109 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC092155.2-201ENST00000454675 477 ntBASIC4.92□□□□□ -1.62
CDH12P55289 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AL035090.1-201ENST00000454835 332 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC093166.2-201ENST00000455969 1017 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH12P55289 AC094085.1-201ENST00000468914 584 ntBASIC4.92□□□□□ -1.62
CDH12P55289 RPL7P41-201ENST00000485823 957 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC134050.1-201ENST00000495088 933 ntBASIC4.92□□□□□ -1.62
CDH12P55289 BOLA3P3-201ENST00000505182 232 ntBASIC4.92□□□□□ -1.62
CDH12P55289 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms